DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and LOC1280856

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_061515716.1 Gene:LOC1280856 / 1280856 VectorBaseID:AGAMI1_006554 Length:811 Species:Anopheles gambiae


Alignment Length:256 Identity:78/256 - (30%)
Similarity:118/256 - (46%) Gaps:21/256 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 TRHGLFPHMAALGWTQGSGSKDQDIK-WGCGGALVSELYVLTAAHCATSGSKPPDMVRLGA--RQ 253
            :.:|.||.|.|:  .:...:.||.|. :.|||:|:....|||||||..:.......||||.  .|
Mosquito   555 SEYGEFPWMVAI--LKEEKALDQVINVYQCGGSLIHPSVVLTAAHCVQNRKIEEVKVRLGEWDTQ 617

  Fly   254 LNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLP----ELQIPT 314
            ........||..::.||.|.::.....::|:|||.|.:.....|.|...|   ||    ...:..
Mosquito   618 TKNEMFDYQDRNVVEIVSHAEFYKGGLFNDVALLFLDKPADLMETVNTIC---LPPANHNFDMSR 679

  Fly   315 VVAAGWGRTEF--LGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQF-CAGYLPG--GR 374
            ..|:|||:..|  .|.....|::::|.::|...|::..|..|...|..:...| |||   |  ||
Mosquito   680 CFASGWGKDVFGKQGTYQVILKKIELPIMPNEECQKALRTTRLGRRFKLHSSFICAG---GEKGR 741

  Fly   375 DTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWIEKIAFKQH 435
            |||:||.|.|:...:|......:..|:.::|..|.....||||..:..:..||:. ..:||
Mosquito   742 DTCKGDGGSPLICPIPGSVNHYYQAGMVAWGIGCGEDGIPGVYVNVPMFRGWIDD-HLRQH 801

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 76/249 (31%)
LOC1280856XP_061515716.1 None
Blue background indicates that the domain is not in the aligned region.

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