DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and LOC1279959

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_061513737.1 Gene:LOC1279959 / 1279959 VectorBaseID:AGAMI1_012587 Length:823 Species:Anopheles gambiae


Alignment Length:428 Identity:113/428 - (26%)
Similarity:167/428 - (39%) Gaps:129/428 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 EDVDDQDTEDEESYL--KFGDDAEVRTSVSEGLHEGAFCRRSFDGRSGYCILAYQ---------- 109
            :|::|:.....:..:  ..|::..|||.: :..|||..|.        :.:|.:.          
Mosquito   466 DDINDEPATTSKDRVGGDGGNNRGVRTEL-QCQHEGGTCE--------FFLLCWMSGGLLQGTCG 521

  Fly   110 -----CLHVIREYRVHGTRIDICT--HRNNVPVI---------CCPLADKHVLAQRISATKCQEY 158
                 |.|  |..:.....||..|  ...|||.:         .|.::    ||::         
Mosquito   522 GMLKGCCH--RTAKSANIGIDASTAVDLTNVPALEYGPVQNDPSCGIS----LAKQ--------- 571

  Fly   159 NAAARRLHLTDTGRTFSGKQCVPSVPLIVGGTPTRHGLFPHMA--ALGWTQGSGSKDQDIKWGCG 221
             .|.||                     ||||.....|.||..|  .:|.::...|:       ||
Mosquito   572 -TAQRR---------------------IVGGDDAGFGSFPWQAYIRIGSSRSMLSR-------CG 607

  Fly   222 GALVSELYVLTAAHCATSGSKPPDMVRLGARQLNETSATQ----QDIKILIIVLHP--KYRSSAY 280
            |:|:|..:|:||.||....:.....|.||...:|  ||.:    ....:..|.:||  |:...|.
Mosquito   608 GSLISRRHVVTAGHCVARATPRQVHVTLGDYVIN--SAVEPLPAYTFGVRTINVHPYFKFTPQAD 670

  Fly   281 YHDIALLKLTRRVKFSEQVRPACL------------WQLPELQIPTVVAAGWGRTEFLGA--KSN 331
            ..|:|:|.|.|.|.|...:.|.||            |           |||||... .|:  :..
Mosquito   671 RFDVAVLTLERTVHFMPHIAPICLPEKNEDFLGKFGW-----------AAGWGALN-PGSRLRPK 723

  Fly   332 ALRQVDLDVVPQMTCKQIYRKERRLPRG----IIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEY 392
            .|:.||:.|:....|::.:|.     .|    |.....||||..||:|:||||||||   |:.|.
Mosquito   724 TLQAVDVPVLDNRVCERWHRS-----NGINVVIYPEMLCAGYRGGGKDSCQGDSGGP---LMHEK 780

  Fly   393 NCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWIEKI 430
            ....:::||.|.|..||....||:|.|:.:.:|||..|
Mosquito   781 TGRWYLIGIVSAGYSCATRGQPGIYHRVANTVDWISHI 818

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829 11/71 (15%)
Tryp_SPc 186..430 CDD:238113 86/269 (32%)
LOC1279959XP_061513737.1 None

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