DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and CG43124

DIOPT Version :9

Sequence 1:NP_001097766.1 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_001247345.1 Gene:CG43124 / 12798282 FlyBaseID:FBgn0262587 Length:245 Species:Drosophila melanogaster


Alignment Length:246 Identity:56/246 - (22%)
Similarity:91/246 - (36%) Gaps:88/246 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 DIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRLGARQLNETSATQQDIKILIIVLHPKYR-SS 278
            |.|..|.|||::.|||||||.|.....|.  .||||:...:::              :..:| :.
  Fly    49 DSKVICAGALINNLYVLTAASCFKENEKL--TVRLGSGYFDKS--------------YENFRVTK 97

  Fly   279 AYY----------HDIALLKLTRRVKFSEQVRPACLWQLPELQIPTVVAAGWGRT-EFLGAKSNA 332
            ||:          :::.:.:|...|:|...:||.|:.:.|:       :.|...| |.:..|   
  Fly    98 AYFWMTHFPANNTNNLCIFRLQTEVEFKTHIRPMCITKSPK-------SLGLATTFEIINEK--- 152

  Fly   333 LRQVDLDVVPQM--TCKQIYRKERRLPRGIIEGQFCAGYL-----------PGGRDTCQGDSGGP 384
                     |:|  .||.            |:|.||. |:           |.|....:..|.||
  Fly   153 ---------PKMWYFCKN------------IKGLFCK-YVFGENEEKWQSKPTGSPWTETISNGP 195

  Fly   385 IHALLPEYNCVAFVVGITSFGKFCAAPNA--PGVYTRLYSYLDWIEKIAFK 433
            ..             |:..:|......|.  ..||..:.|:::||.:|:.:
  Fly   196 FK-------------GLVRYGILSYRDNKTYDEVYINVMSHINWIAQISLE 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_001097766.1 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 55/241 (23%)
Tryp_SPc 186..427 CDD:214473 53/238 (22%)
CG43124NP_001247345.1 Tryp_SPc 41..>133 CDD:304450 27/99 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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