DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and LOC1279386

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_319102.5 Gene:LOC1279386 / 1279386 VectorBaseID:AGAMI1_005107 Length:282 Species:Anopheles gambiae


Alignment Length:255 Identity:79/255 - (30%)
Similarity:123/255 - (48%) Gaps:40/255 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRLG 250
            ||||.|.....:|:..:|  .:|        :..|||:::...::||||||..:.:.....:.:|
Mosquito    40 IVGGVPVDIRDYPYQVSL--RRG--------RHFCGGSIIDSQWILTAAHCTRTINARNLWIHVG 94

  Fly   251 ARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPELQIPT- 314
            :..:|:..   :.:::..|:.|||..|.:.| |.:||.|.:.:..||.|:|..| :.|....|| 
Mosquito    95 SSHVNDGG---ESVRVRRILHHPKQNSWSDY-DFSLLHLDQPLNLSESVQPIPL-RKPSASEPTG 154

  Fly   315 -------VVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGI---IEGQFCAGY 369
                   ...:|||.|......:..||...:.:.....|.::|       .||   .|...||||
Mosquito   155 ELSDGTLCKVSGWGNTHNPDESALVLRAATVPLTNHQRCSEVY-------EGIGSVTESMICAGY 212

  Fly   370 LPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWIEK 429
            ..||:|:||||||||:       .|...:.|:.|:||.||.|..||||.::.:..||||:
Mosquito   213 DEGGKDSCQGDSGGPL-------VCDGQLTGVVSWGKGCAEPGYPGVYAKVSTAYDWIEQ 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 79/255 (31%)
LOC1279386XP_319102.5 None
Blue background indicates that the domain is not in the aligned region.

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