DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and LOC1278167

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_317712.5 Gene:LOC1278167 / 1278167 VectorBaseID:AGAMI1_011617 Length:390 Species:Anopheles gambiae


Alignment Length:281 Identity:83/281 - (29%)
Similarity:127/281 - (45%) Gaps:32/281 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 TGRTFSGKQCVPSVPLIVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAA 234
            |.....|::.:.:...|..|..:..|.||...||..|:    :...|.:.|||.:|.|..|:|||
Mosquito    25 TTNVLCGQRPIAAPGTITYGRSSWPGQFPWHVALYRTE----QPLTISYACGGFIVGERVVITAA 85

  Fly   235 HCATSGS-----KPPDMVRLGARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVK 294
            ||.|:.|     .....||:|...|...:...|:.::..|..|..:.:.:..||:|||.|...|:
Mosquito    86 HCVTAPSGYQLAADELTVRVGLYDLLTLARHSQEHRVGRIHRHGNFTTGSLRHDLALLMLRTIVE 150

  Fly   295 FSEQVRPACLWQLPEL--QIPTVVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLP 357
            |.:.|:|.||.:.|:.  .:.|...:|||..|. .:.:..||...:.||..::|.|   .:..|.
Mosquito   151 FGDFVQPICLPREPDALKGVRTGTVSGWGLVED-DSPARTLRSATMPVVSYLSCLQ---SDSTLF 211

  Fly   358 RGII-EGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSF--------GKF---CAA 410
            ..:: :|.||||: ..|.:.|.|||||   |.....|......||.||        |:.   |..
Mosquito   212 GPVLYDGMFCAGW-ENGTNVCNGDSGG---AFAANVNGSWTAFGIVSFTGVREHTDGQTPFRCDT 272

  Fly   411 PNAPGVYTRLYSYLDWIEKIA 431
            .:..| :..:..||:|||.:|
Mosquito   273 KSLAG-FISIPMYLNWIESVA 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 80/262 (31%)
LOC1278167XP_317712.5 None
Blue background indicates that the domain is not in the aligned region.

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