DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and LOC1277787

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_061518491.1 Gene:LOC1277787 / 1277787 VectorBaseID:AGAMI1_006660 Length:527 Species:Anopheles gambiae


Alignment Length:260 Identity:81/260 - (31%)
Similarity:123/260 - (47%) Gaps:32/260 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 PSVPLIVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPD 245
            |....||||    |...|:  ...|..|..:..:..   |||:|:..:::||||||....|. .|
Mosquito   284 PDTERIVGG----HNADPN--EWPWIAGLFNNGRQF---CGGSLIDSIHILTAAHCVAHMSS-YD 338

  Fly   246 M----VRLGARQLNETSATQQ-DIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLW 305
            :    |:||...:...:..|. :.::..:|.|..:.|...|:|:|:|.:.:.|.|::||||.|  
Mosquito   339 VARLSVKLGDHNIRSNTEVQHVERRVKRLVRHRGFDSRTLYNDVAVLTMDQAVPFTKQVRPIC-- 401

  Fly   306 QLPELQIP------TVVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQ 364
             ||.....      |....|||.....|.:...|::|:|.:.....|:..|..  ..|.|||:..
Mosquito   402 -LPAADSTRAYSGLTATVIGWGSLRENGPQPAILQEVNLPIWTNNECRIKYGP--AAPGGIIDTM 463

  Fly   365 FCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWIEK 429
            .|||  ...:|:|.||||||:.....::.    .||:.|:|..|.....||||||:.::|.||:|
Mosquito   464 LCAG--QAAKDSCSGDSGGPLMVNDGKWT----QVGVVSWGIGCGKGQYPGVYTRVTAFLPWIKK 522

  Fly   430  429
            Mosquito   523  522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 80/255 (31%)
LOC1277787XP_061518491.1 None
Blue background indicates that the domain is not in the aligned region.

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