DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and LOC1277688

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_317170.3 Gene:LOC1277688 / 1277688 VectorBaseID:AGAMI1_001361 Length:274 Species:Anopheles gambiae


Alignment Length:290 Identity:95/290 - (32%)
Similarity:141/290 - (48%) Gaps:32/290 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 VLAQRISATKCQEYNAAARRLHLTDTGRTFSGKQCVPSVPLIVGGTPTRHGLFPHMAALGWTQGS 209
            :||..::...|.|..|..|. .|.....:||.:........||||........|:..:|.:.:  
Mosquito     8 LLAVLVAVVACAEAQANQRH-RLVRPSPSFSPRPRYAVGQRIVGGFEIDVSDAPYQVSLQYNK-- 69

  Fly   210 GSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRLGARQLNETSATQQDIKILIIVLHPK 274
                   :..|||:::|..:|||||||....|.....||||..: :.:..|.  :::..:|.|||
Mosquito    70 -------RHNCGGSVLSSKWVLTAAHCTAGASTSSLTVRLGTSR-HASGGTV--VRVARVVQHPK 124

  Fly   275 YRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPEL----QIPTVVAAGWGRTEFLGAKSNA-LR 334
            |.||:...|.:||:|...:.||:.|:|..|.:..|.    .:.||  :|||.|: ..|:||| ||
Mosquito   125 YDSSSIDFDYSLLELEDELTFSDAVQPVGLPKQDESVKDGTMTTV--SGWGNTQ-SAAESNAVLR 186

  Fly   335 QVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVV 399
            ..::..|.|..|.:.|...    .|:.:...||||..||:|.||||||||:.|       ...:|
Mosquito   187 AANVPTVNQKECNKAYSDF----GGVTDRMLCAGYQQGGKDACQGDSGGPLVA-------DGKLV 240

  Fly   400 GITSFGKFCAAPNAPGVYTRLYSYLDWIEK 429
            |:.|:|..||....||||:|:....||:.:
Mosquito   241 GVVSWGYGCAQAGYPGVYSRVAVVRDWVRE 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 86/249 (35%)
LOC1277688XP_317170.3 None
Blue background indicates that the domain is not in the aligned region.

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