DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and LOC1277577

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_061518106.1 Gene:LOC1277577 / 1277577 VectorBaseID:AGAMI1_003819 Length:919 Species:Anopheles gambiae


Alignment Length:250 Identity:111/250 - (44%)
Similarity:150/250 - (60%) Gaps:12/250 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 VPLIVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHC-ATSGSKPPDM 246
            :||...|.|.....|.||||:|||..:|.    |.|.|||:|:.|.|||||||| |...:..||:
Mosquito    65 LPLPAFGRPAYLREFAHMAAVGWTGENGK----IDWNCGGSLIWENYVLTAAHCTADDNNAAPDV 125

  Fly   247 VRLGARQLNETSATQ--QDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPE 309
            ||||...|::.|..:  |.:||:.|:.||::|.|:.|||:|||:|.|.|...:.|.|.|||...|
Mosquito   126 VRLGDINLDDDSDDKYAQQLKIVEIIRHPEHRFSSRYHDLALLRLERNVTLHDTVAPGCLWNDEE 190

  Fly   310 LQIPTVVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRK-ERRLPRGIIEGQFCAGYLPGG 373
            :..|::.|.|||.|.|..||:..|.:|.|.:||:.||.|.||| :|.|.:|:.:.|.|||.:.  
Mosquito   191 IPFPSMEATGWGSTGFGQAKTPILLKVSLSLVPKSTCDQQYRKGDRGLRQGLQDYQLCAGDIK-- 253

  Fly   374 RDTCQGDSGGPIH-ALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWI 427
            .|||.||||||:. .||.......|::.:||||..| ..:.||||.::..|:.||
Mosquito   254 MDTCPGDSGGPLQMKLLANAKMTPFIIAVTSFGSVC-GQSTPGVYMKVSPYIPWI 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 108/246 (44%)
LOC1277577XP_061518106.1 None
Blue background indicates that the domain is not in the aligned region.

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