DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and LOC1276364

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_315702.5 Gene:LOC1276364 / 1276364 VectorBaseID:AGAMI1_011229 Length:301 Species:Anopheles gambiae


Alignment Length:288 Identity:77/288 - (26%)
Similarity:121/288 - (42%) Gaps:69/288 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 HLTDTGRTFSGKQCVPSVPLIVGGTPTRHGLFPHMAAL--GWTQGSGSKDQDIKWGCGGALVSEL 228
            ::..|.|..:|::..|             |.|||..||  .:...:|.        |||::::..
Mosquito    49 NMNRTNRITNGQEVTP-------------GQFPHQIALLSEYATSTGL--------CGGSILTRN 92

  Fly   229 YVLTAAHCATSGSKPPDMVR-----LGARQLNETSATQQDIKILI--IVLHPKYRSSAYYHDIAL 286
            .:||||||..||  |..:..     :||...|...:|||.|:...  |.:||:|..::..:|||.
Mosquito    93 TILTAAHCVVSG--PSTLASGGVAIMGAHNRNVQESTQQRIRFATSGIRVHPQYNLASIRNDIAT 155

  Fly   287 LKLTRRVKFSEQVRPACLWQLPELQIP-----------TVVAAGWGRTEFLGAKSNALRQVDLDV 340
            ::|...:.|:.:::|        :::|           |...:|:|||......::|:  |....
Mosquito   156 VRLNSPMTFTTRIQP--------IRLPGRSDTRQFGGFTGTVSGFGRTSDASTATSAV--VRFTT 210

  Fly   341 VPQMT---CKQIYRKERRLPRGIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGIT 402
            .|.||   |      ..|....:::.|.......|||..|.|||||    .|...:.....:|:.
Mosquito   211 NPVMTNADC------VARWGTTMVQNQNVCLSGAGGRSACNGDSGG----ALTVQSGGTLQIGVV 265

  Fly   403 SFGKF--CAAPNAPGVYTRLYSYLDWIE 428
            ||...  ||. ..|.||.|:..:|.|||
Mosquito   266 SFVSVNGCAV-GMPSVYARVSFFLPWIE 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 73/268 (27%)
LOC1276364XP_315702.5 None
Blue background indicates that the domain is not in the aligned region.

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