DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and LOC1276311

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_315638.4 Gene:LOC1276311 / 1276311 VectorBaseID:AGAMI1_005289 Length:1321 Species:Anopheles gambiae


Alignment Length:323 Identity:98/323 - (30%)
Similarity:152/323 - (47%) Gaps:46/323 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 CTHRNNVPVICCPLADKHVLAQRISATKCQ---EYNAAARRLHLTDTGR----------TFSGKQ 178
            |.|..:|.|.|.........|.|:.||:..   ::...:|::|....||          |:..: 
Mosquito  1014 CGHTEDVGVRCGVYVPTKARAARLRATRPNPRFDFVERSRKIHPDTCGRVLIDPTLRKPTYGAR- 1077

  Fly   179 CVPSVPLIVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKP 243
                   :|.|:.|.:|..|..|:|        :.:.:.| ||..|::..:|||||||.....|.
Mosquito  1078 -------VVHGSETVYGHHPWQASL--------RVKTMHW-CGAVLITRYHVLTAAHCLIGYPKS 1126

  Fly   244 PDMVRLGARQLNETSATQQDIKILIIVLHPKYRSSAYY-HDIALLKLTRRVKFSEQVRPACL--W 305
            ...||:|..........:.||.|....:|.::|...:. :|||::.|...|:|::.|:|.||  .
Mosquito  1127 TYRVRIGDYHTAAYDNAELDIFIENTYIHEQFREGHHMSNDIAVVVLKTPVRFNDYVQPICLPAR 1191

  Fly   306 QLPELQIPTVVAAGWGRTEFLGAKSNA--LRQVDLDVVPQMTCK--QIYRKERRLPRGIIEGQFC 366
            ..|.|.......:|||.|| .|:|.::  ||...:.::|...|:  ::|..      .:|:|.||
Mosquito  1192 DAPYLPGQNCTISGWGATE-AGSKDSSYDLRAGTVPLLPDSVCRRPEVYGD------SLIDGMFC 1249

  Fly   367 AGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWIEK 429
            ||.|..|.|:|.||||||:  :.|....:..:.||.|:||.|...|.||||.::..|.||||:
Mosquito  1250 AGTLEPGVDSCDGDSGGPL--VCPNSEGLHTLTGIVSWGKHCGYANKPGVYLKVAHYRDWIEQ 1310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829 5/11 (45%)
Tryp_SPc 186..430 CDD:238113 84/251 (33%)
LOC1276311XP_315638.4 None

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