DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and LOC1275260

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_314498.3 Gene:LOC1275260 / 1275260 VectorBaseID:AGAMI1_001483 Length:927 Species:Anopheles gambiae


Alignment Length:249 Identity:69/249 - (27%)
Similarity:119/249 - (47%) Gaps:30/249 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 FPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCAT-SGSKPPDMVRLGARQLNETSAT 260
            :.|:|.:|..:..|:    |.|.|.|||:.:..|:|:|.|.| .|:..|.:||||..:.      
Mosquito    75 YSHIATIGRRRNGGT----IDWTCMGALIWDSVVITSAQCTTDEGNGIPSVVRLGGTKY------ 129

  Fly   261 QQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLW---QLPELQIPTVVAAGWGR 322
            .|.|.|..::.||.:..|...:|||||:|.|::..:|...|.|||   .:|..::.::     ||
Mosquito   130 VQVINIKEVIRHPDFLPSNGQNDIALLQLDRKIIINETAVPTCLWLFDGVPFQKLDSI-----GR 189

  Fly   323 TEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLP----RGIIEGQFCAGYLPGGRDTCQG-DSG 382
            |     .::..:|....|..:||...:..::...|    :|:.|.|.|...|....|.||. ..|
Mosquito   190 T-----AASRRQQTPEFVTEEMTTVNVKSEDCFAPMTRNQGLPESQLCMETLKQNADNCQDIPEG 249

  Fly   383 GPIHA-LLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWIEKIAFKQH 435
            .|:.| ||..:....|::|:.:......:.|....||::.|:.||:.::..:::
Mosquito   250 NPLQARLLHNFQTSPFLIGLVTSSFTSGSCNRRRGYTKIGSHRDWLMQVLLERN 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 69/242 (29%)
LOC1275260XP_314498.3 None
Blue background indicates that the domain is not in the aligned region.

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