DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and LOC1274708

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_313869.6 Gene:LOC1274708 / 1274708 VectorBaseID:AGAMI1_014022 Length:327 Species:Anopheles gambiae


Alignment Length:303 Identity:98/303 - (32%)
Similarity:141/303 - (46%) Gaps:62/303 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 PVICCPLADKHVLAQRISATKCQEYNAAARRLHLTDTGRTFSGKQCVPSVPLIVGGTPTRHGLFP 198
            |...||:.            ||...|...|                      ||||..|:...:|
Mosquito    65 PPDSCPMC------------KCGRTNRLTR----------------------IVGGQETQVNQYP 95

  Fly   199 HMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRLGARQLNETSATQQD 263
            .||.|   |.||:      :.|||:|:|:.:|||||||....::....|.|.......||.:...
Mosquito    96 WMAML---QYSGT------FYCGGSLISDRHVLTAAHCVHGFNRNKISVVLMEHDRVSTSESMTM 151

  Fly   264 I-KILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPELQIPTV----VAAGWGRT 323
            : |:|.::.|..|.|:.|..|||:|:|...:...:::||.|   ||..:.|..    :..|||.|
Mosquito   152 VSKVLRVIEHNGYNSNNYNSDIAILRLATVMTIEDKLRPVC---LPTPKKPFTGYDGIVTGWGAT 213

  Fly   324 EFLGAKSNALRQVDLDVVPQMTCKQI-YRKERRLPRGIIEGQFCAGYLPGGRDTCQGDSGGPIHA 387
            ...||.|..|::|.:.::....|::. |...|     |.:...||||..|.:|:||||||||:|.
Mosquito   214 SENGAISTNLQEVTVPIMSNADCRKTGYGASR-----ITDNMLCAGYDEGKKDSCQGDSGGPLHV 273

  Fly   388 LLPEYNC---VAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWI 427
            :  :.|.   |..:.||.|:|:.||.||.||||||:..:..||
Mosquito   274 I--KQNSTDNVHQIAGIVSWGEGCAKPNYPGVYTRVNRFGTWI 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829 1/4 (25%)
Tryp_SPc 186..430 CDD:238113 91/251 (36%)
LOC1274708XP_313869.6 None

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