DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snk and LOC1273118

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_312070.5 Gene:LOC1273118 / 1273118 VectorBaseID:AGAMI1_000544 Length:282 Species:Anopheles gambiae


Alignment Length:260 Identity:106/260 - (40%)
Similarity:149/260 - (57%) Gaps:19/260 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 VPLIVGGTPTRHGLFPHMAALGWT--QGSGSKDQD-IKWGCGGALVSELYVLTAAHCATSG-SKP 243
            |..||||.......|||||.||.:  |..|....| .:|.|||.|:|:.:||||||||.:| |.|
Mosquito    23 VGAIVGGDSATADEFPHMAVLGRSCLQADGGDCVDGYEWFCGGTLISDRFVLTAAHCAHTGMSHP 87

  Fly   244 PDMVRLGARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQ-- 306
            |.:|:|||..|...:..   :.:..:||||.|.....|:||||::|...|  :..::||.||:  
Mosquito    88 PTVVQLGAHDLRRPALY---VGVRDVVLHPGYGGVLAYNDIALIRLESPV--ASSIQPALLWRSE 147

  Fly   307 -LPELQIPTVVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGYL 370
             :|| .:| ::|.|||:.......|..|::|.:.:||...|.|:..:.|||..|::..|.|||..
Mosquito   148 TIPE-NVP-LIATGWGKLGHFEDPSMILQRVQIPIVPNSQCNQLLYRSRRLRHGVLPSQLCAGDP 210

  Fly   371 PGGRDTCQGDSGGPIHALLPEYNCVA-----FVVGITSFGKFCAAPNAPGVYTRLYSYLDWIEKI 430
            .||:|||:||||||:...||....:.     :||||||.|..|...:.||:|||:.||..||:::
Mosquito   211 NGGKDTCEGDSGGPLQLKLPSARPIGQAYRYYVVGITSNGGICGTVDRPGLYTRVSSYAGWIDQV 275

  Fly   431  430
            Mosquito   276  275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 105/255 (41%)
LOC1273118XP_312070.5 Tryp_SPc 26..275 CDD:238113 105/255 (41%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.