DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and LOC1270347

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_309032.3 Gene:LOC1270347 / 1270347 VectorBaseID:AGAMI1_008148 Length:258 Species:Anopheles gambiae


Alignment Length:248 Identity:75/248 - (30%)
Similarity:117/248 - (47%) Gaps:36/248 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWG--CGGALVSELYVLTAAHCATSGSKPPD-MV 247
            :|||...::|..|:..:|   |..|       ||  |||:|::..:|||||||.. |.:|.| ||
Mosquito    33 VVGGEVAKNGSAPYQVSL---QVPG-------WGHNCGGSLLNNRWVLTAAHCLV-GYEPSDLMV 86

  Fly   248 RLGARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPELQI 312
            .:|...|.|..   :.:|:..::.|.:|....:::||.|::|.:.|:|||.|:..   :..|..:
Mosquito    87 LVGTNSLKEGG---ELLKVDKLLYHSRYNRPQFHNDIGLMRLEQPVQFSELVQSV---EYLEKAV 145

  Fly   313 P---TVVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGYLPGGR 374
            |   ||...|||||...|.....|:.:::..:....||    .:...|..:..|..|. ....|.
Mosquito   146 PVNATVRLTGWGRTSTNGNVPTLLQSLNVVTLSNEDCK----AKMGNPENVDLGHVCT-LTKAGE 205

  Fly   375 DTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWI 427
            ..|.||||||:     .|.  ..:||:.:||..|.. ..|..:.|:..|.:|:
Mosquito   206 GACNGDSGGPL-----VYE--GKLVGVVNFGVPCGR-GFPDGFARVSYYHEWV 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 75/248 (30%)
LOC1270347XP_309032.3 None
Blue background indicates that the domain is not in the aligned region.

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