DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and LOC1270209

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_308888.1 Gene:LOC1270209 / 1270209 VectorBaseID:AGAMI1_002591 Length:272 Species:Anopheles gambiae


Alignment Length:266 Identity:70/266 - (26%)
Similarity:115/266 - (43%) Gaps:52/266 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 FSGKQCVPS---VPL-------IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSEL 228
            :..|:.:||   :|:       ||||.......||:..:|   :.:|:..      ||.:::|..
Mosquito    25 YQSKRRLPSGLVLPIAPPTSGRIVGGFEANIADFPYQLSL---RQNGAHI------CGASVISSN 80

  Fly   229 YVLTAAHCATSGSKPPDMVRLGARQLNETSA-----TQQDIKILIIVLHPKYRSSAYYHDIALLK 288
            |.|:|||| |..:.|...:.|.....:.|:.     |.:      |:.||.|..|:...|:.:::
Mosquito    81 YALSAAHC-TFPAPPVAAITLRGGSTDRTAGGVVFQTAE------IINHPSYSDSSLDFDVCVIR 138

  Fly   289 LTRRVKFSEQVRPACLWQLPE-LQIP---TVVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQI 349
            :|... ....:.|..|  .|| ...|   ..:.:|||.|..:||....|:.|::.::.|.:|:.:
Mosquito   139 ITTSF-VGANIAPITL--APEGTDYPEGTRTMVSGWGATSAIGALPINLQAVEVPLISQESCRGV 200

  Fly   350 YRKERRLPRGIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAP 414
            :.     ...:.:...||.  ..|||.|.||||||:       ......:||.|:|......|.|
Mosquito   201 WG-----AASVTDNMVCAS--EPGRDACGGDSGGPL-------TNNGRQIGIVSWGSPLCLGNLP 251

  Fly   415 GVYTRL 420
            |||.|:
Mosquito   252 GVYARV 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 66/244 (27%)
LOC1270209XP_308888.1 Tryp_SPc 46..259 CDD:214473 66/245 (27%)
Blue background indicates that the domain is not in the aligned region.

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