DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and ndl

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_061502719.1 Gene:ndl / 1269883 VectorBaseID:AGAMI1_012252 Length:2292 Species:Anopheles gambiae


Alignment Length:323 Identity:92/323 - (28%)
Similarity:148/323 - (45%) Gaps:63/323 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 NNVPV-ICCPLADKHVLAQRISATKCQEYNAAARRLHLTDTGRTFSGKQCVPSVPLIVGGTPTRH 194
            |.|.| :.||       |.|...::..|.:||  |:::. |.|..:..:.|.|| .||||:....
Mosquito   914 NGVYVHVKCP-------AVRCGTSRMHEQHAA--RINVR-TRREANESEIVESV-RIVGGSHADP 967

  Fly   195 GLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRLGARQLNETSA 259
            ..:|.:..:         .:|.|:.|||::.:|.::::||||..:..:....||.|..:....:.
Mosquito   968 EAYPFIVGI---------FRDGKYHCGGSIYNEHWIISAAHCCDNFDQHYFEVRSGMLRKRSFAP 1023

  Fly   260 TQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPELQIPT---------- 314
            ..|..::..:::|..|.||...:||||:::.....::..|||.|   :||....|          
Mosquito  1024 QVQITRVTHMIVHHAYSSSLMANDIALMRVEHPFHYNRWVRPIC---MPERHRTTDDRDWIWGPK 1085

  Fly   315 ----VVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGYLPGGRD 375
                ..|.|||.....|...:.|.||.:.::..  ||  ::.:|.      ..|.||....||.|
Mosquito  1086 AGTVCTAIGWGALRERGGAPDHLMQVSVPILGY--CK--HKSDRD------SLQICAAEEDGGHD 1140

  Fly   376 TCQGDSGGPIHALLPEYNCVA-------FVVGITSFGKFCAAPNAPGVYTRLYSYLDWI-EKI 430
            .||||||||       :.|.:       ::.|:.|.|:.||..:.||||||:..::||| ||:
Mosquito  1141 ACQGDSGGP-------FVCQSKSNPFEWYLAGVVSHGEGCARAHEPGVYTRVALFIDWIAEKV 1196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829 3/8 (38%)
Tryp_SPc 186..430 CDD:238113 75/265 (28%)
ndlXP_061502719.1 None

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