DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snk and Prss29

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_444490.2 Gene:Prss29 / 114662 MGIID:2149952 Length:279 Species:Mus musculus


Alignment Length:275 Identity:75/275 - (27%)
Similarity:117/275 - (42%) Gaps:67/275 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 IVGGTPTRHGLFPHMAALG--------WTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSK 242
            ||||.....|.:|...:|.        |..           .|||:::...:|||||||......
Mouse    31 IVGGHSAPQGKWPWQVSLRIYRYYWAFWVH-----------NCGGSIIHPQWVLTAAHCIRERDA 84

  Fly   243 PPDMVRL--------GARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQV 299
            .|.:.|:        |.::|         :.:..:::||.:..:....|:|||:|...|:....|
Mouse    85 DPSVFRIRVGEAYLYGGKEL---------LSVSRVIIHPDFVHAGLGSDVALLQLAVSVQSFPNV 140

  Fly   300 RPACLWQLPELQIPTVV-----AAGWGRTEFLGAKSN--------ALRQVDLDVVPQMTCKQIY- 350
            :|.   :||...:....     ..||      ||.|.        .|:||.:.::....|:::| 
Mouse   141 KPV---KLPSESLEVTKKDVCWVTGW------GAVSTHRSLPPPYRLQQVQVKIIDNSLCEEMYH 196

  Fly   351 ---RKERRLPRGIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPN 412
               |...|..:.|::...|||  ..|:|:|.||||||   |:........:||:.|:|..||..:
Mouse   197 NATRHRNRGQKLILKDMLCAG--NQGQDSCYGDSGGP---LVCNVTGSWTLVGVVSWGYGCALRD 256

  Fly   413 APGVYTRLYSYLDWI 427
            .||||.|:.|:|.||
Mouse   257 FPGVYARVQSFLPWI 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 75/275 (27%)
Prss29NP_444490.2 Tryp_SPc 31..274 CDD:238113 75/275 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.