DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and LOC110439063

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_021329148.2 Gene:LOC110439063 / 110439063 -ID:- Length:252 Species:Danio rerio


Alignment Length:269 Identity:80/269 - (29%)
Similarity:120/269 - (44%) Gaps:41/269 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 HLTDTGRTFSGKQCVPSVPLIVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYV 230
            |||.|...           .||.|...:....|:|.::   |..|   |:|   |.|.|:|:.:|
Zfish    17 HLTFTAHV-----------SIVDGQEAKPHSRPYMVSV---QLFG---QNI---CAGFLISDRFV 61

  Fly   231 LTAAHCATSGSKPPDMVRLGARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKF 295
            ||||.|.....|...:| :||..|.:...::. .|::..:.||::.|..:.:||.||||.|:|..
Zfish    62 LTAAQCWHHNRKALTVV-VGAHDLRKCQHSKH-FKVMCHITHPEFNSKTFENDIMLLKLKRKVPL 124

  Fly   296 SEQVRPACLWQLPE-LQIPTVVA-AGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPR 358
            :.::||..|.:..| .:..|:.: |||||....|..|:.|.:....:|....||      .|...
Zfish   125 NNKIRPISLPKNGERFKADTLCSVAGWGRLWTDGPVSDLLLEAKTAIVNDAECK------LRWGY 183

  Fly   359 GIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGK--FCAAPNAPGVYTRLY 421
            ..:.......:..||  :|.||.|||:       .|....||||.|..  .|.:...|.|||::.
Zfish   184 HYVPSMMICAFGHGG--SCNGDGGGPL-------VCGNTAVGITIFRDRYLCNSRLLPNVYTKIS 239

  Fly   422 SYLDWIEKI 430
            :|:.||..|
Zfish   240 AYVPWIRSI 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 75/247 (30%)
LOC110439063XP_021329148.2 Tryp_SPc 26..248 CDD:238113 75/247 (30%)
Blue background indicates that the domain is not in the aligned region.

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