DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and Cela1

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_291090.2 Gene:Cela1 / 109901 MGIID:95314 Length:266 Species:Mus musculus


Alignment Length:260 Identity:82/260 - (31%)
Similarity:118/260 - (45%) Gaps:39/260 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKW--GCGGALVSELYVLTAAHCATSGSKPPDMVR 248
            :|||...|...:|...:|.:..| ||      |  .|||.|:...:|:|||||..|    |...|
Mouse    27 VVGGAEARRNSWPSQISLQYQYG-GS------WHHTCGGTLIRSNWVMTAAHCVDS----PMTYR 80

  Fly   249 --LGARQLNETSATQQDIKILIIVLHPKYRSSAYY--HDIALLKLTRRVKFSEQVRPACLWQLPE 309
              :|...|::...|:|.:.:..||.||.:..:...  :|||||:|.:.|..:..|:   |..|| 
Mouse    81 VVVGEHNLSQNDGTEQYVNVQKIVSHPYWNKNNVVAGYDIALLRLAKSVTLNNYVQ---LGVLP- 141

  Fly   310 LQIPTVVA-------AGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCA 367
             :..|::|       .|||||...|..:..|:|..|..|....|.    ........:.....||
Mouse   142 -REGTILANNSPCYITGWGRTRTNGELAQTLQQAYLPSVSYSICS----SSSYWGSSVKNTMVCA 201

  Fly   368 GYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSF--GKFCAAPNAPGVYTRLYSYLDWIEKI 430
            |. .|.|..||||||||:|.::   |....|.|:|||  ...|.....|.|:||:.:|:.|:..:
Mouse   202 GG-DGVRSGCQGDSGGPLHCMV---NGQYAVHGVTSFVSSMGCNVARKPTVFTRVSAYISWMNNV 262

  Fly   431  430
            Mouse   263  262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 82/258 (32%)
Cela1NP_291090.2 Tryp_SPc 27..262 CDD:238113 82/258 (32%)
Blue background indicates that the domain is not in the aligned region.

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