DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and LOC108648789

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_031749506.1 Gene:LOC108648789 / 108648789 XenbaseID:XB-GENE-29091211 Length:289 Species:Xenopus tropicalis


Alignment Length:267 Identity:84/267 - (31%)
Similarity:129/267 - (48%) Gaps:36/267 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 VPL----IVGGTPTRHGLFPHMAAL---GWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSG 240
            |||    |:||....:|.:|..|.|   |:..           .|||.|:.|.::||||.|..|.
 Frog    29 VPLVRSRIMGGQEAPYGKWPWQANLRRPGYYP-----------YCGGTLIGEKWILTAAACIHSN 82

  Fly   241 SKPPDMVRLGARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLW 305
            :|....|.:|...|:.|...:|.:.:..|::||.||......:||||:|..:|:.::...|.|  
 Frog    83 TKSSFQVFVGDYNLDNTDKGEQPVSVKRIIIHPSYREGYLNDNIALLELATKVQMNKVTLPVC-- 145

  Fly   306 QLPELQI-----PTVVAAGWGRTEFLGA---KSNALRQVDLDVVPQMTCKQIYR---KERRLPRG 359
             ||:..:     ......|||:. ..||   ....||:|::.::....|..::.   ...|....
 Frog   146 -LPDASVTFPDGQKCSVTGWGQI-MDGADPPSPRVLREVEVKMMSNDRCNTLFNIPDAYGRTTAN 208

  Fly   360 IIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYL 424
            :.:...||||..||||:|.||.|||:  :.|: :...::.|:.|.|..|..||.||:|||:.||:
 Frog   209 LTDTMLCAGYAKGGRDSCNGDVGGPL--VCPK-DGRWYLAGVVSGGDGCGKPNRPGIYTRVSSYI 270

  Fly   425 DWIEKIA 431
            .||..:|
 Frog   271 KWITGVA 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 80/257 (31%)
LOC108648789XP_031749506.1 Tryp_SPc 36..273 CDD:238113 78/254 (31%)
Blue background indicates that the domain is not in the aligned region.

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