DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and LOC100498532

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_001333498.1 Gene:LOC100498532 / 100498532 XenbaseID:XB-GENE-29084287 Length:251 Species:Xenopus tropicalis


Alignment Length:283 Identity:90/283 - (31%)
Similarity:139/283 - (49%) Gaps:60/283 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 AAARRLHLTDTGRTFSGKQCVP-SVPLIVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGA 223
            |||..|. .|..:...|.:|.| |.|..|        ||        |...|:      | |||:
 Frog    13 AAAAPLD-DDDDKIVGGYECTPHSQPWQV--------LF--------TYNGGN------W-CGGS 53

  Fly   224 LVSELYVLTAAHCATSGSKPPD--MVRLGARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIAL 286
            |:|..::::||||    .:||.  :..||...|.:...|:|.|::.....|..|:..|:.|||.|
 Frog    54 LISPRWIISAAHC----YQPPKTLVALLGEHDLKKKEGTEQHIQVEAAYKHFGYKDKAHDHDIML 114

  Fly   287 LKLTRRVKFSEQVRPACLWQLPELQ-IPT----VVAAGWGRTEFLGAK---SNALRQVDLDVVPQ 343
            :||.:..::::.|:|     :|..: .||    .:.:|:|..  ||..   .:.|:.:::.:|..
 Frog   115 VKLAKPAQYNQYVQP-----IPVARSCPTDGAKCLVSGFGNV--LGYNVRYPDQLQCLEVPIVSD 172

  Fly   344 MTCKQIYRKERRLPRGIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSF-GKF 407
            .:||..|      ||.|.|..||||:|.||:.:|.||||||:       .|...:.|..|: |.:
 Frog   173 SSCKASY------PRMISENMFCAGFLEGGKGSCHGDSGGPL-------ICNGELYGAVSWGGSY 224

  Fly   408 CAAPNAPGVYTRLYSYLDWIEKI 430
            |.:.|:||||.::.:|||||:.|
 Frog   225 CISKNSPGVYAKVCNYLDWIKNI 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 79/254 (31%)
LOC100498532NP_001333498.1 Tryp_SPc 25..247 CDD:238113 84/268 (31%)
Blue background indicates that the domain is not in the aligned region.

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