DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snk and XB5962685

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_002941155.3 Gene:XB5962685 / 100496550 XenbaseID:XB-GENE-5962686 Length:251 Species:Xenopus tropicalis


Alignment Length:266 Identity:76/266 - (28%)
Similarity:123/266 - (46%) Gaps:40/266 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 VPSVPLIVGGTPTRHGL--------FPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHC 236
            :|::.:::..||...|:        .||.........:||.      .|||.|:.:.:|||||.|
 Frog     5 IPALFVLLLNTPICAGMGITGGKEAIPHARRYMALVRTGSN------LCGGTLIKDNWVLTAATC 63

  Fly   237 ATSGSKPPDMVRLGARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRP 301
            ....:...|   ||...:...:..:|..|:...|.|.|:...:|.:::.||:|:.:..||..|. 
 Frog    64 KVDRTTTVD---LGVHSIKTMNKLRQQFKVARWVPHQKFDRRSYVNNLQLLQLSSKANFSYAVN- 124

  Fly   302 ACLWQLP----ELQIPTVV-AAGWGRTEFLG-AKSNALRQVDLDVVPQMTCKQIYRKERRLPRGI 360
              :..||    :::..||. .||||.|.:.| .:|:.|.:|.|.|:.:|.|...::.:.::.:.:
 Frog   125 --ILLLPTKYKDIKPGTVCETAGWGITAYNGKQQSDKLMEVSLTVLDRMQCNNQWKSKIKITKDM 187

  Fly   361 IEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGK-FCAAPNAPGVYTRLYS-Y 423
            :    |... .|.|..|.||.|||:       .|...:.|:.|||. .|...|...|||||.| |
 Frog   188 M----CTRD-KGKRGFCNGDGGGPL-------ICNRILTGVISFGPLICGMENGANVYTRLTSNY 240

  Fly   424 LDWIEK 429
            :.||:|
 Frog   241 IKWIKK 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 75/260 (29%)
XB5962685XP_002941155.3 Tryp_SPc 23..246 CDD:238113 71/246 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.