DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and prss8l.5 loc108703873

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_002939739.1 Gene:prss8l.5 loc108703873 / 100494289 XenbaseID:XB-GENE-22167980 Length:353 Species:Xenopus tropicalis


Alignment Length:261 Identity:90/261 - (34%)
Similarity:134/261 - (51%) Gaps:40/261 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDM--VR 248
            |:||..::.|::|      |.....|.|...   |||:|::..:|::|:|| .:.:.||..  |.
 Frog    36 IMGGQDSQQGMWP------WQVNIRSNDFSF---CGGSLITSKWVISASHC-FNRTNPPSFYTVY 90

  Fly   249 LGARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPE--LQ 311
            ||:.||...:..:..:.|...::||.|.|..|.|||.|::|:..|.|:..::|.|   ||.  :.
 Frog    91 LGSYQLTGANGNEIPMAIQRFIVHPNYTSPEYGHDITLVELSSDVNFTNYIQPVC---LPSAGVN 152

  Fly   312 IPTVV---AAGWGR--TEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRG-----IIEGQFC 366
            .||.:   ..|||.  :.......|.|:||.:.::....|..|.:...  |.|     |:....|
 Frog   153 FPTGLQCWVTGWGNIASNVSLRDPNTLQQVAVPLIGNQQCNSILQAPS--PLGPSSFAILNDMLC 215

  Fly   367 AGYLPGGRDTCQGDSGGPIHALLPEYNCVA----FVVGITSFGKFCAAPNAPGVYTRLYSYLDWI 427
            |||:.||:|:||||||||:       .|.|    ::||:.|||..|..||.||||.|:.:|||||
 Frog   216 AGYIDGGKDSCQGDSGGPL-------VCAAANQWYLVGVVSFGDGCGQPNRPGVYVRVTAYLDWI 273

  Fly   428 E 428
            |
 Frog   274 E 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 90/261 (34%)
prss8l.5 loc108703873XP_002939739.1 Tryp_SPc 36..275 CDD:238113 90/261 (34%)
Blue background indicates that the domain is not in the aligned region.

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