DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and tmprss3a

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_001429713.1 Gene:tmprss3a / 100000148 ZFINID:ZDB-GENE-070912-70 Length:543 Species:Danio rerio


Alignment Length:295 Identity:94/295 - (31%)
Similarity:132/295 - (44%) Gaps:59/295 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 SATKCQEYNAAARRLHLTDTGRTFSGKQCVPSVPLIVGGTPTRHGLFPHMAALGWTQGSGSKDQD 215
            |.|||......|.:.....:...||.:        ||||..:..|.||      |......:::.
Zfish   271 SKTKCSLGMVTALKCIACGSRPKFSAR--------IVGGNLSAEGQFP------WQVSLHFQNEH 321

  Fly   216 IKWGCGGALVSELYVLTAAHCATSGSKPPD-MVRLGARQ--LNETSATQQDIKILIIVLHPKYRS 277
            :   |||::::..::||||||....:.|.. ||..|..:  ||...|    ..:..|:.|.:||.
Zfish   322 L---CGGSIITSRWILTAAHCVYGIAYPMYWMVYAGLTELPLNAVKA----FAVEKIIYHSRYRP 379

  Fly   278 SAYYHDIALLKLTRRVKFSEQVRPACL-------------WQLPELQIPTVVAAGWGRTEFLGAK 329
            ....|||||:||.:.:.|:..|.|.||             |           .:|||.||..|..
Zfish   380 KGLDHDIALMKLAQPLTFNGMVEPICLPNFGEQFEDGKMCW-----------ISGWGATEDGGDA 433

  Fly   330 SNALRQVDLDVVPQMTCKQ--IYRKERRLPRGIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEY 392
            |.:.....:.::....|.|  :|:..      :..|..|||||.||.|:||||||||   |..|.
Zfish   434 SVSQHCASVPLISNKACSQPEVYQGY------LTAGMICAGYLDGGTDSCQGDSGGP---LACED 489

  Fly   393 NCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWI 427
            :.:..:||.||:|:.||..|.||||||:...|.||
Zfish   490 SSIWKLVGATSWGQGCAEKNKPGVYTRITQSLTWI 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 87/260 (33%)
tmprss3aNP_001429713.1 None
Blue background indicates that the domain is not in the aligned region.

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