DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ry and AO1

DIOPT Version :9

Sequence 1:NP_524337.1 Gene:ry / 41605 FlyBaseID:FBgn0003308 Length:1335 Species:Drosophila melanogaster
Sequence 2:NP_568407.2 Gene:AO1 / 832221 AraportID:AT5G20960 Length:1368 Species:Arabidopsis thaliana


Alignment Length:1430 Identity:449/1430 - (31%)
Similarity:707/1430 - (49%) Gaps:182/1430 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SNSVLVFFVNGKKV-TEVSP-DPECTLLTFLREKLRLCGTKLGCAEGGCGACTVMVSRLDRRANK 64
            |.:.|||.:||::. .|:|. ||..||:.|||.|......||||.|||||||.|::|:.|....|
plant    17 SKTSLVFAINGQRFELELSSIDPSTTLVDFLRNKTPFKSVKLGCGEGGCGACVVLLSKYDPLLEK 81

  Fly    65 IRHLAVNACLTPVCSMHGCAVTTVEGIGSTKTRLHPVQERLAKAHGSQCGFCTPGIVMSMYALLR 129
            :....:::|||.:||:.||::||.:|:|:::...|.|.||:|..|.:||||||||:.:||::.|.
plant    82 VDEFTISSCLTLLCSIDGCSITTSDGLGNSRVGFHAVHERIAGFHATQCGFCTPGMSVSMFSALL 146

  Fly   130 NAEQ--PSMR---------DLEVAFQGNLCRCTGYRPILEGYKTFTKEF---ACGMGEKCCKVSG 180
            ||::  |..|         :.|.|..|||||||||||:::..|:|..:.   ..|....|.|   
plant   147 NADKSHPPPRSGFSNLTAVEAEKAVSGNLCRCTGYRPLVDACKSFAADVDIEDLGFNAFCKK--- 208

  Fly   181 KGCGTDAETDDKLFERSEFQPLDPSQEPIFPPELQLSDAFDSQSLIFSSDRVTWYRPTNLEELLQ 245
                  .|..|::..|........|....| ||....:..:..||  .|.:..|..|.::.||..
plant   209 ------GENRDEVLRRLPCYDHTSSHVCTF-PEFLKKEIKNDMSL--HSRKYRWSSPVSVSELQG 264

  Fly   246 LKAKHP--AAKLVVGNTEVGVEVKFKHFLYPHLINPTQVKELLEIKENQDGIYFGAAVSLMEIDA 308
            |.....  :.|||.|||..|...:.|...|...|:..::.|...::.::.|:..||.|::.:...
plant   265 LLEVENGLSVKLVAGNTSTGYYKEEKERKYERFIDIRKIPEFTMVRSDEKGVELGACVTISKAIE 329

  Fly   309 LLRQRIEQLPESETRLFQCTVDMLHYFAGKQIRNVACLGGNIMTGS----PISDMNPVLSAAGAQ 369
            :||:      |....:.......:...|.:.:||...:|||||...    | ||:..:|.||.|.
plant   330 VLRE------EKNVSVLAKIATHMEKIANRFVRNTGTIGGNIMMAQRKQFP-SDLATILVAAQAT 387

  Fly   370 LEVASFVDGKLQKRSVHMGTGFFT---GYRRNVIEAHEVLLGIHF-------RKTTPDQYIVAFK 424
            :::.:....:.|          ||   ..::..::|..:||.:..       :..:.:..|:.|:
plant   388 VKIMTSSSSQEQ----------FTLEEFLQQPPLDAKSLLLSLEIPSWHSAKKNGSSEDSILLFE 442

  Fly   425 QARRR----DDDIAIVNAAINVRFEEKSN--IVAEISMAFGGMAPTTV-LAPRTSQLMVGQEWSH 482
            ..|..    .:.:|.:|||.:....|..:  :|.:..:.||....... .|.:..:.:.|:..|.
plant   443 TYRAAPRPLGNALAFLNAAFSAEVTEALDGIVVNDCQLVFGAYGTKHAHRAKKVEEFLTGKVISD 507

  Fly   483 QLVERVAESLCTEL--PLAASAPGGMIAYRRALVVSLFFKAYLAISLKLSKS------------G 533
            :::......|..|:  ....|.||    ||.:|.|:..|:.:.:::.|.:|:            |
plant   508 EVLMEAISLLKDEIVPDKGTSNPG----YRSSLAVTFLFEFFGSLTKKNAKTTNGWLNGGCKEIG 568

  Fly   534 ITSS-DALPSEERSGAETFHTPVLKSAQLFERVCSDQPICDPIGRPKVHAAALKQATGEAIYTDD 597
            ...: ::|..|          .:|.|||   ::..:|. ..|:|:....|.|..||:|||:|.||
plant   569 FDQNVESLKPE----------AMLSSAQ---QIVENQE-HSPVGKGITKAGACLQASGEAVYVDD 619

  Fly   598 IPRMDGEVYLAFVLSTKPRAKITKLDASEALALDGVHQFFCYKDLTEHENEVGP--VFHDEHVFA 660
            ||..:..:|.||:.||.|.|:|..:...:....:||.....|||:.:....:|.  .|..:.:||
plant   620 IPAPENCLYGAFIYSTMPLARIKGIRFKQNRVPEGVLGIITYKDIPKGGQNIGTNGFFTSDLLFA 684

  Fly   661 AGEVHCYGQIVGAIAADNKALAQRAARLVKVEYE--ELSPVIVTIEQAIEHKSYF--PDYPRFVT 721
            ....||.|||:..:.||::..|..||.||.::|:  :|.|.|:::|:|:|:.|.|  |...|...
plant   685 EEVTHCAGQIIAFLVADSQKHADIAANLVVIDYDTKDLKPPILSLEEAVENFSLFEVPPPLRGYP 749

  Fly   722 KGNVEEALAQADHTFEGT-CRMGGQEHFYLETHAALAVPRDSDELELFCSTQHPSEVQKLVAHVT 785
            .|::.:.:.:|:|...|: ...|.|..||:||..|||||.:.:.:.::.|||.|..|.:.:|...
plant   750 VGDITKGMDEAEHKILGSKISFGSQYFFYMETQTALAVPDEDNCMVVYSSTQTPEFVHQTIAGCL 814

  Fly   786 ALPAHRVVCRAKRLGGGFGGKESRGISVALPVALAAYRMGRPVRCMLDRDEDMLITGTRHPFLFK 850
            .:|.:.|....:|:|||||||..:.:.||...||||.:|.||||..::|..||:.||.|||....
plant   815 GVPENNVRVITRRVGGGFGGKAVKSMPVAAACALAASKMQRPVRTYVNRKTDMITTGGRHPMKVT 879

  Fly   851 YKVGFTKEGLITACDIECYNNAGWSMDLSFSV---LERAMFHFENCYRIPNVRVGGWVCKTNLPS 912
            |.|||...|.|||.|:|...:||.:.|:|..:   ::.|:..::......||:    |||||..|
plant   880 YSVGFKSNGKITALDVEVLLDAGLTEDISPLMPKGIQGALMKYDWGALSFNVK----VCKTNTVS 940

  Fly   913 NTAFRGFGGPQGMYAGEHIIRDVARIVGRDVVDVMRLNFY-----------KTGDYTHYHQQLEH 966
            .||.|..|..||.|.||.||..||..:..||.::.::|.:           |.|:::.|...|  
plant   941 RTALRAPGDVQGSYIGEAIIEKVASYLSVDVDEIRKVNLHTYESLRLFHSAKAGEFSEYTLPL-- 1003

  Fly   967 FPIERCLEDCLKQ-SRYDEKRQEIARFNRENRWRKRGMAVVPTKYGIAFGVMHLNQAGSLINIYG 1030
                  |.|.:.: |.::::|:.:..||..|:|||||::.||..|.:     ::......:::.|
plant  1004 ------LWDRIDEFSGFNKRRKVVEEFNASNKWRKRGISRVPAVYAV-----NMRSTPGRVSVLG 1057

  Fly  1031 DGSVLLSHGGVEIGQGLNTKMIQCAARALGI------PSEL---IHISETATDKVPNTSPTAASV 1086
            |||:::...|:||||||.||:.|.||.:||:      ..||   |.:.::.|..:...|.||.|.
plant  1058 DGSIVVEVQGIEIGQGLWTKVKQMAAYSLGLIQCGTTSDELLKKIRVIQSDTLSMVQGSMTAGST 1122

  Fly  1087 GSDLNGMAVLDACEKLNKRLAPIKEAL---PGG--TWKEWINKAYFDRVSLSATGFYAMPGIGYH 1146
            .|:.:..||...|:.|.:||.|:|.||   .||  ||...|::||...:::|.:..| ||.    
plant  1123 TSEASSEAVRICCDGLVERLLPVKTALVEQTGGPVTWDSLISQAYQQSINMSVSSKY-MPD---- 1182

  Fly  1147 PETNPNARTYSYYTNGVGVTVVEIDCLTGDHQVLSTDIVMDIGSSLNPAIDIGQIEGAFMQGYGL 1211
                   .|..|...|:..:.||::.|||:..:|.|||:.|.|.|||||:|:|||||||:||.|.
plant  1183 -------STGEYLNYGIAASEVEVNVLTGETTILRTDIIYDCGKSLNPAVDLGQIEGAFVQGLGF 1240

  Fly  1212 FTLEELMYSPQGMLYSRGPGMYKLPGFADIPGEFNVSLLTGAPNPRAVYSSKAVGEPPLFIGSSA 1276
            |.|||.:.:..|::.:.....||:|....||.:|||.:|....:...|.||||.|||||.:.:|.
plant  1241 FMLEEFLMNSDGLVVTDSTWTYKIPTVDTIPRQFNVEILNSGQHKNRVLSSKASGEPPLLLAASV 1305

  Fly  1277 FFAIKEAIAAARED--------QGLSGDFPLEAPSTSARIRIACQDKFTELLEIPEPGSFTPWNI 1333
            ..|::.|:..||:.        ||....|.|..|:|...::..|.      |::.|  .:..|.|
plant  1306 HCAVRAAVKEARKQILSWNSNKQGTDMYFELPVPATMPIVKEFCG------LDVVE--KYLEWKI 1362

  Fly  1334  1333
            plant  1363  1362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ryNP_524337.1 Fer2 8..78 CDD:278537 31/71 (44%)
PLN02906 25..1317 CDD:215491 435/1387 (31%)
Fer2_2 87..158 CDD:280048 37/81 (46%)
FAD_binding_5 231..411 CDD:279309 44/188 (23%)
CO_deh_flav_C 422..525 CDD:281449 23/111 (21%)
Ald_Xan_dh_C 589..696 CDD:279635 38/110 (35%)
Ald_Xan_dh_C2 716..1242 CDD:280834 195/555 (35%)
AO1NP_568407.2 PLN00192 16..1364 CDD:215096 449/1430 (31%)
Fer2_2 104..188 CDD:280048 37/83 (45%)
FAD_binding_5 249..425 CDD:279309 44/192 (23%)
CO_deh_flav_C 443..545 CDD:281449 22/105 (21%)
Ald_Xan_dh_C 611..721 CDD:279635 38/109 (35%)
Ald_Xan_dh_C2 750..1271 CDD:280834 194/549 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D48717at2759
OrthoFinder 1 1.000 - - FOG0000201
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100184
Panther 1 1.100 - - O PTHR11908
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.820

Return to query results.
Submit another query.