DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtBP and Grhpr

DIOPT Version :9

Sequence 1:NP_001262522.1 Gene:CtBP / 41602 FlyBaseID:FBgn0020496 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_001107226.1 Gene:Grhpr / 680021 RGDID:1308851 Length:335 Species:Rattus norvegicus


Alignment Length:350 Identity:92/350 - (26%)
Similarity:141/350 - (40%) Gaps:55/350 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 FANGPLQARPLVALLDGRDCSIEM-----PI----LKDVATVAFCDAQSTSEIHEKVLNEAVGAL 74
            |..|||.|:...||....||.:|.     ||    |:.....|:......|:..:|.|.:|.|| 
  Rat    17 FVTGPLPAQGRAALAQATDCEVEQWNSDDPIPSKDLEQGVAGAYGLLCRLSDRVDKKLLDAAGA- 80

  Fly    75 MWHTIILTKEDLEKFKALRIIVRIGSGTDNIDVKAAGELGIAVCNVPGYGVEEVADTTMCLILNL 139
                            .||:|..:..|.|::.:....:.||.|...||...:..|:..:.|:|..
  Rat    81 ----------------NLRVISTLSVGVDHLALDEIKKRGIRVGYTPGVLTDATAELAVSLLLTT 129

  Fly   140 YRRTYWLANMVREGKKFTGPEQVREAAHG----------CA-RIRGDTLGLVGLGRIGSAVALRA 193
            .||.               ||.:.|..:|          |. .:...|:|:|||||||.|:|.|.
  Rat   130 CRRL---------------PEAIEEVKNGGWSSWSPLWMCGYGLSESTVGIVGLGRIGQAIARRL 179

  Fly   194 KAFGFNVIFYDPYLPDGIDKSLGLTRVYTLQDLLFQSDCVSLHCTLNEHNHHLINEFTIKQMRPG 258
            |.||.....|....|...:.:........:..|..:||.:.:.|:|......|.|:...::|:..
  Rat   180 KPFGVQRFLYTGRQPRPQEAAEFQAEFVPIAQLAAESDFIVVSCSLTPATRGLCNKDFFQKMKNT 244

  Fly   259 AFLVNTARGGLVDDETLALALKQGRIRAAALDVHENEPY--NGALKDAPNLICTPHAAFFSDASA 321
            |..:|.:||.:|:.|.|..||..|:|.||.|||...||.  :..|....|.:..||....:..:.
  Rat   245 AVFINISRGDVVNQEDLYQALASGQIAAAGLDVTTPEPLPPSHPLLTLKNCVILPHIGSATYKTR 309

  Fly   322 TELREMAATEIRRAIVGN-IPDVLR 345
            ..:..:||..:...:.|. :|..|:
  Rat   310 NTMSLLAANNLLAGLRGEPMPSELK 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtBPNP_001262522.1 CtBP_dh 28..342 CDD:240624 85/336 (25%)
LdhA 45..351 CDD:223980 80/314 (25%)
GrhprNP_001107226.1 GDH 14..326 CDD:240626 89/340 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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