DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtBP and ctbp2a

DIOPT Version :9

Sequence 1:NP_001262522.1 Gene:CtBP / 41602 FlyBaseID:FBgn0020496 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_001182420.1 Gene:ctbp2a / 65230 ZFINID:ZDB-GENE-010130-2 Length:1147 Species:Danio rerio


Alignment Length:368 Identity:265/368 - (72%)
Similarity:308/368 - (83%) Gaps:7/368 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VKGNFANGPLQARPLVALLDGRDCSIEMPILKDVATVAFCDAQSTSEIHEKVLNEAVGALMWHTI 79
            ::....|||:..||||||||||||::|||||||:|||||||||||.|||||||||||||:|:|||
Zfish   764 IRPQIMNGPMHPRPLVALLDGRDCTVEMPILKDLATVAFCDAQSTQEIHEKVLNEAVGAMMYHTI 828

  Fly    80 ILTKEDLEKFKALRIIVRIGSGTDNIDVKAAGELGIAVCNVPGYGVEEVADTTMCLILNLYRRTY 144
            .||:||||||||||||:|||||.||||:|||||:||||||:|...|||.||:|:|.|||||||..
Zfish   829 TLTREDLEKFKALRIIIRIGSGYDNIDIKAAGEMGIAVCNIPSAAVEETADSTLCHILNLYRRNT 893

  Fly   145 WLANMVREGKKFTGPEQVREAAHGCARIRGDTLGLVGLGRIGSAVALRAKAFGFNVIFYDPYLPD 209
            ||...:|||.:....||:||.|.|.|||||:||||:|.||.|.|||:||||||||||||||||.|
Zfish   894 WLYQAMREGTRVQSVEQIREVASGAARIRGETLGLIGFGRSGQAVAVRAKAFGFNVIFYDPYLQD 958

  Fly   210 GIDKSLGLTRVYTLQDLLFQSDCVSLHCTLNEHNHHLINEFTIKQMRPGAFLVNTARGGLVDDET 274
            |:::|||:.|||||||||:|||||||||.||||||||||:|||||||.||||||||||||||::.
Zfish   959 GLERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHLINDFTIKQMRQGAFLVNTARGGLVDEKA 1023

  Fly   275 LALALKQGRIRAAALDVHENEPYN---GALKDAPNLICTPHAAFFSDASATELREMAATEIRRAI 336
            ||.|||:||||.|||||||:||::   |.||||||||||||.|::|:.::.|:||.|||||||||
Zfish  1024 LAQALKEGRIRGAALDVHESEPFSFTQGPLKDAPNLICTPHTAWYSEQASLEMREAAATEIRRAI 1088

  Fly   337 VGNIPDVLRNCVNKEYFMRTPPAAAAGGVAAAVYPEGLNGGYY 379
            .|.|||.||||||||:|:.|.|   .|.:...|:|| ||||.|
Zfish  1089 TGRIPDSLRNCVNKEFFVTTAP---WGVMEQQVHPE-LNGGAY 1127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtBPNP_001262522.1 CtBP_dh 28..342 CDD:240624 239/316 (76%)
LdhA 45..351 CDD:223980 232/308 (75%)
ctbp2aNP_001182420.1 FLO_LFY 416..>486 CDD:279962
CtBP_dh 777..1095 CDD:240624 240/317 (76%)
SerA 793..1103 CDD:223189 233/309 (75%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 492 1.000 Domainoid score I357
eggNOG 1 0.900 - - E1_COG0111
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H75187
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D305212at33208
OrthoFinder 1 1.000 - - FOG0001579
OrthoInspector 1 1.000 - - otm24526
orthoMCL 1 0.900 - - OOG6_102736
Panther 1 1.100 - - LDO PTHR46029
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.820

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