DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtBP and Phgdh

DIOPT Version :9

Sequence 1:NP_001262522.1 Gene:CtBP / 41602 FlyBaseID:FBgn0020496 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_113808.1 Gene:Phgdh / 58835 RGDID:61987 Length:533 Species:Rattus norvegicus


Alignment Length:400 Identity:114/400 - (28%)
Similarity:181/400 - (45%) Gaps:45/400 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 LNEAVGALMWHTIILTKEDLEKFKALRIIVRIGSGTDNIDVKAAGELGIAVCNVPGYGVEEVADT 131
            |.:..|.::.....:|.:.:...:.|:::.|.|:|.||:|::||...|:.|.|.|.......|:.
  Rat    45 LQDCEGLIVRSATKVTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGVLVMNTPNGNSLSAAEL 109

  Fly   132 T----MCLILNLYRRTYWLANMVREGKKFTGPEQVREAAHGCARIRGDTLGLVGLGRIGSAVALR 192
            |    |||...:.:.|..:.:...:.|||.|.|           :.|.|||::||||||..||.|
  Rat   110 TCGMLMCLARQIPQATASMKDGKWDRKKFMGTE-----------LNGKTLGILGLGRIGREVAAR 163

  Fly   193 AKAFGFNVIFYDPYLPDGIDKSLGLTRVYTLQDLLFQSDCVSLHCTLNEHNHHLINEFTIKQMRP 257
            .:|||...:.|||.:...:..|.|:.:: .|:::....|.:::|..|......|:|:.|..|.:.
  Rat   164 MQAFGMKTVGYDPIISPEVAASFGVQQL-PLEEIWPLCDFITVHTPLLPSTTGLLNDSTFAQCKK 227

  Fly   258 GAFLVNTARGGLVDDETLALALKQGRIRAAALDVH-ENEPYNGALKDAPNLICTPHAAFFSDASA 321
            |..:||.||||:||:..|..||:.|:...|||||. |..|.:.||.|..|:|..||..    ||.
  Rat   228 GVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEPPRDRALVDHENVISCPHLG----AST 288

  Fly   322 TELREMAATEIRRAIVGNIP-DVLRNCVNKE-----YFMRTPPAAAAGGVAAAVYPEGLNGGYYT 380
            .|.:.....||....|..:. ..|...||.:     :...|.|..   |:|.|:           
  Rat   289 KEAQSRCGEEIAVQFVDMVKGKSLTGVVNAQALTSAFSPHTKPWI---GLAEAL----------- 339

  Fly   381 GALHHRAHSTTPHDGPHSTTNLGSTVGGGPTTVAQAAAAAVAAAAAAALLPSPVPSHLSPQVGGL 445
            |.|.| |.:.:| .|.......|:::....|.::.|....:...|:.....:.|.:.|..:..| 
  Rat   340 GTLMH-AWAGSP-KGTIQVVTQGTSLKNAGTCLSPAVIVGLLREASKQADVNLVNAKLLVKEAG- 401

  Fly   446 PLGIVSSQSP 455
             |.:.:|.||
  Rat   402 -LNVTTSHSP 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtBPNP_001262522.1 CtBP_dh 28..342 CDD:240624 89/280 (32%)
LdhA 45..351 CDD:223980 92/289 (32%)
PhgdhNP_113808.1 PRK13581 8..490 CDD:237436 113/399 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0111
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D305212at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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