DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtBP and ctbp2l

DIOPT Version :9

Sequence 1:NP_001262522.1 Gene:CtBP / 41602 FlyBaseID:FBgn0020496 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_001016866.1 Gene:ctbp2l / 549620 XenbaseID:XB-GENE-22063047 Length:437 Species:Xenopus tropicalis


Alignment Length:480 Identity:283/480 - (58%)
Similarity:335/480 - (69%) Gaps:62/480 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDKNLMMPKRSRID-----VKGNFANGPLQARPLVALLDGRDCSIEMPILKDVATVAFCDAQSTS 60
            |||:.:  ||.|:|     ::....|||:..||||||||||||::|||||||||||||||||||.
 Frog     1 MDKHKV--KRQRLDRICEGIRPPILNGPMPVRPLVALLDGRDCTVEMPILKDVATVAFCDAQSTQ 63

  Fly    61 EIHEKVLNEAVGALMWHTIILTKEDLEKFKALRIIVRIGSGTDNIDVKAAGELGIAVCNVPGYGV 125
            |||||||:|||||||:|||.|::||||||||||||:|||||.||||:|:|.||||||||:|...|
 Frog    64 EIHEKVLSEAVGALMYHTISLSREDLEKFKALRIIIRIGSGYDNIDIKSAAELGIAVCNIPSSSV 128

  Fly   126 EEVADTTMCLILNLYRRTYWLANMVREGKKFTGPEQVREAAHGCARIRGDTLGLVGLGRIGSAVA 190
            ||.||:|:|.|||||||..||...:|||.:....||:||.|.|.|||||:|||::||||||.|||
 Frog   129 EETADSTLCHILNLYRRVTWLHQAMREGNRPASVEQIREVAGGAARIRGETLGIIGLGRIGQAVA 193

  Fly   191 LRAKAFGFNVIFYDPYLPDGIDKSLGLTRVYTLQDLLFQSDCVSLHCTLNEHNHHLINEFTIKQM 255
            ||||||.|.|||||||||||:::||||.|:.|||:||..|||::|||:||||||||||:||||||
 Frog   194 LRAKAFNFTVIFYDPYLPDGVERSLGLQRMATLQELLMHSDCITLHCSLNEHNHHLINDFTIKQM 258

  Fly   256 RPGAFLVNTARGGLVDDETLALALKQGRIRAAALDVHENEPYN---GALKDAPNLICTPHAAFFS 317
            |.|.||||||||||||::.||.|||.||||.|||||||:||::   |.||||||||||||.|::|
 Frog   259 RQGCFLVNTARGGLVDEKALAQALKDGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHTAWYS 323

  Fly   318 DASATELREMAATEIRRAIVGNIPDVLRNCVNKEYFMRTPPAAA--AGGVAAAVYPEGLNG-GYY 379
            :.::.|.||.||.||||||.|.|||.|||||||||.:    ||.  :|...|.|:|| ||| |.|
 Frog   324 EHASIEAREEAAKEIRRAIAGPIPDALRNCVNKEYLL----AAVQWSGMEQATVHPE-LNGAGSY 383

  Fly   380 ---TGALHHRAHSTTPHDGPHSTTNLGSTVGGGPTTVAQAAAAAVAAAAAAALLPSPVPSH-LSP 440
               .|.                   :|.|..|.|:.:....|:                || |.|
 Frog   384 RFPPGV-------------------VGVTTTGHPSAIEGLVAS----------------SHPLIP 413

  Fly   441 QVGGLPLGIVSSQSPLSAPDPNNHL 465
            .|...|     |....|.|||:..:
 Frog   414 SVSHTP-----SPGQTSKPDPDREI 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtBPNP_001262522.1 CtBP_dh 28..342 CDD:240624 232/316 (73%)
LdhA 45..351 CDD:223980 225/308 (73%)
ctbp2lNP_001016866.1 CtBP_dh 31..348 CDD:240624 232/316 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 492 1.000 Domainoid score I373
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 527 1.000 Inparanoid score I1206
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D305212at33208
OrthoFinder 1 1.000 - - FOG0001579
OrthoInspector 1 1.000 - - otm48011
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1820
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
77.060

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