DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CtBP and ctbp2l

DIOPT Version :9

Sequence 1:NP_001262522.1 Gene:CtBP / 41602 FlyBaseID:FBgn0020496 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_001015064.1 Gene:ctbp2l / 548605 ZFINID:ZDB-GENE-050902-1 Length:860 Species:Danio rerio


Alignment Length:368 Identity:264/368 - (71%)
Similarity:308/368 - (83%) Gaps:7/368 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VKGNFANGPLQARPLVALLDGRDCSIEMPILKDVATVAFCDAQSTSEIHEKVLNEAVGALMWHTI 79
            ::....||||..||||||||||||::|||||||:|||||||||||.|||||||||||||||:|||
Zfish   477 IRPQLVNGPLHPRPLVALLDGRDCTVEMPILKDLATVAFCDAQSTQEIHEKVLNEAVGALMYHTI 541

  Fly    80 ILTKEDLEKFKALRIIVRIGSGTDNIDVKAAGELGIAVCNVPGYGVEEVADTTMCLILNLYRRTY 144
            .||:|||||||||||::|||||.||||:|||||:||||||:|...|||.||:|:|.:||||||..
Zfish   542 TLTREDLEKFKALRIVIRIGSGYDNIDIKAAGEMGIAVCNIPSAAVEETADSTLCHVLNLYRRNT 606

  Fly   145 WLANMVREGKKFTGPEQVREAAHGCARIRGDTLGLVGLGRIGSAVALRAKAFGFNVIFYDPYLPD 209
            ||...:|||.:....||:||.|.|.|||||:||||:||||.|.|||:|||.||||||||||||.|
Zfish   607 WLYRALREGTRVQSVEQIREVASGAARIRGETLGLIGLGRSGQAVAVRAKVFGFNVIFYDPYLQD 671

  Fly   210 GIDKSLGLTRVYTLQDLLFQSDCVSLHCTLNEHNHHLINEFTIKQMRPGAFLVNTARGGLVDDET 274
            |:::|||:.|||||||||:|||||||||.|||||||||::|||||||.||||||||||||||::.
Zfish   672 GLERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHLISDFTIKQMRQGAFLVNTARGGLVDEKA 736

  Fly   275 LALALKQGRIRAAALDVHENEPYN---GALKDAPNLICTPHAAFFSDASATELREMAATEIRRAI 336
            ||.|||:||||.|||||||:||::   |.||||||||||||.|::|:.::.|:||.|||||||||
Zfish   737 LAQALKEGRIRGAALDVHESEPFSFTQGPLKDAPNLICTPHTAWYSEQASLEMREAAATEIRRAI 801

  Fly   337 VGNIPDVLRNCVNKEYFMRTPPAAAAGGVAAAVYPEGLNGGYY 379
            .|.|||.||||||||:|:.|.|   .|.:...|:|| ||||.|
Zfish   802 TGRIPDSLRNCVNKEFFVTTAP---WGVMEQQVHPE-LNGGAY 840

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtBPNP_001262522.1 CtBP_dh 28..342 CDD:240624 237/316 (75%)
LdhA 45..351 CDD:223980 230/308 (75%)
ctbp2lNP_001015064.1 SerA 475..816 CDD:223189 250/338 (74%)
CtBP_dh 490..808 CDD:240624 238/317 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H75187
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D305212at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR46029
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.020

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