DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtBP and ctbp1

DIOPT Version :9

Sequence 1:NP_001262522.1 Gene:CtBP / 41602 FlyBaseID:FBgn0020496 Length:481 Species:Drosophila melanogaster
Sequence 2:XP_031754353.1 Gene:ctbp1 / 493289 XenbaseID:XB-GENE-483379 Length:479 Species:Xenopus tropicalis


Alignment Length:472 Identity:287/472 - (60%)
Similarity:336/472 - (71%) Gaps:52/472 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 MMPKRSRIDVKGNFANGPLQARPLVALLDGRDCSIEMPILKDVATVAFCDAQSTSEIHEKVLNEA 70
            |:...|...::....|||:..||||||||||||::|||||||||||||||||||.||||||||||
 Frog    45 MIGSSSDPGIRPPIMNGPMHPRPLVALLDGRDCTVEMPILKDVATVAFCDAQSTQEIHEKVLNEA 109

  Fly    71 VGALMWHTIILTKEDLEKFKALRIIVRIGSGTDNIDVKAAGELGIAVCNVPGYGVEEVADTTMCL 135
            |||||:|||.||:||||||||||||||||||.||||:|:||:|||||||||...|||.||:|||.
 Frog   110 VGALMYHTITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTMCH 174

  Fly   136 ILNLYRRTYWLANMVREGKKFTGPEQVREAAHGCARIRGDTLGLVGLGRIGSAVALRAKAFGFNV 200
            ||||||||.||...:|||.:....||:||.|.|.|||||:|||::||||:|.|||||||.|||||
 Frog   175 ILNLYRRTTWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKTFGFNV 239

  Fly   201 IFYDPYLPDGIDKSLGLTRVYTLQDLLFQSDCVSLHCTLNEHNHHLINEFTIKQMRPGAFLVNTA 265
            .||||||.|||:::|||.||.|||||||.||||:|||:||||||||||:|||||||.||||||||
 Frog   240 YFYDPYLSDGIERALGLQRVSTLQDLLFNSDCVTLHCSLNEHNHHLINDFTIKQMRQGAFLVNTA 304

  Fly   266 RGGLVDDETLALALKQGRIRAAALDVHENEPYN---GALKDAPNLICTPHAAFFSDASATELREM 327
            ||||||::.||.|||:||||.|||||||:||::   ||||||||||||||||::|:.::.|:||.
 Frog   305 RGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGALKDAPNLICTPHAAWYSEQASIEMREE 369

  Fly   328 AATEIRRAIVGNIPDVLRNCVNKEYF-MRTPPAAAAGGVAAAVYPEGLNGGYYTGALHHRAHSTT 391
            ||.||||||.|.|||.|:|||||::. ..|..|:...||   |:|| ||||.|            
 Frog   370 AAREIRRAITGRIPDSLKNCVNKDHLTAATHWASMDPGV---VHPE-LNGGAY------------ 418

  Fly   392 PHDGPHSTTNLGSTVGGGPTTVAQAAAAAVAAAAAAALLPSPVP-SHLSPQVGGLPLGIVSSQSP 455
                         ....|..:||.|.    ..||...::|:.:| ||..|.|          ..|
 Frog   419 -------------RYSQGVVSVAPAG----IPAAVEGIVPTAMPLSHGHPAV----------VHP 456

  Fly   456 LSAPDPNNHLSSSIKTE 472
            ..||.|    ..::|.|
 Frog   457 PHAPSP----GQTVKPE 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtBPNP_001262522.1 CtBP_dh 28..342 CDD:240624 243/316 (77%)
LdhA 45..351 CDD:223980 235/308 (76%)
ctbp1XP_031754353.1 CtBP_dh 67..385 CDD:240624 244/317 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 492 1.000 Domainoid score I373
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 527 1.000 Inparanoid score I1206
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D305212at33208
OrthoFinder 1 1.000 - - FOG0001579
OrthoInspector 1 1.000 - - otm48011
Panther 1 1.100 - - O PTHR46029
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1820
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

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