DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtBP and phgdh

DIOPT Version :9

Sequence 1:NP_001262522.1 Gene:CtBP / 41602 FlyBaseID:FBgn0020496 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_955871.2 Gene:phgdh / 321928 ZFINID:ZDB-GENE-030131-647 Length:528 Species:Danio rerio


Alignment Length:386 Identity:117/386 - (30%)
Similarity:173/386 - (44%) Gaps:66/386 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 LTKEDLEKFKALRIIVRIGSGTDNIDVKAAGELGIAVCNVPGYGVEEVADTTMCLILNLYRRTYW 145
            :|.:.:....:|:||.|.|:|.||:||.||.:.||.|.|.|.......|:.|..|:::|.|....
Zfish    59 VTADVINAGSSLKIIGRAGTGVDNVDVDAATKRGIIVMNTPSGNTLSAAELTCALVMSLSRHIPQ 123

  Fly   146 LANMVREG----KKFTGPEQVREAAHGCARIRGDTLGLVGLGRIGSAVALRAKAFGFNVIFYDPY 206
            ....:::|    |||.|.|           :.|..||:|||||||..||.|.::||...|.|||.
Zfish   124 AVISMKDGKWDRKKFMGSE-----------LYGKVLGIVGLGRIGKEVATRMQSFGMKTIGYDPI 177

  Fly   207 LPDGIDKSLGLTRVYTLQDLLFQSDCVSLHCTLNEHNHHLINEFTIKQMRPGAFLVNTARGGLVD 271
            .|..:..|.|:.:: ||..|..|.|.:::|..|......|:|:.:..:.:.|..:||.||||::|
Zfish   178 TPPEVSASWGVEQM-TLDQLWPQCDYITVHTPLMASTTGLLNDASFAKCKKGVKVVNCARGGIID 241

  Fly   272 DETLALALKQGRIRAAALDVH-ENEPYNGALKDAPNLICTPHAAFFSDASATELREMAATEIR-- 333
            :..|..||:.|:...|.|||. |..|...||.:.||:|..||..    ||..|.:.....:|.  
Zfish   242 EAALLRALESGQCGGAGLDVFVEEPPRERALVNHPNVISCPHLG----ASTKEAQARCGKDIALQ 302

  Fly   334 -------RAIVGNIPDVLRNCVNKEYFMRTPPAAAAGGVAAAVYPEG---LNGGYYTG-ALHHRA 387
                   :|:||                    |..|..:|:...|:.   :..|...| .|...:
Zfish   303 IVDMATGKALVG--------------------AVNAQVLASTFSPDSQQWIRLGESMGKVLKACS 347

  Fly   388 HSTTPHDGPHSTTNLGSTVGGGPTTVAQAAAAAVAAAAAAALLPSPVPSHLSPQ-VGGLPL 447
            .||.|....| .|:||..:        :.:...:::||...|| :..| |..|. |..|||
Zfish   348 ASTQPCSQLH-VTSLGEAL--------KKSTGFLSSAAVVGLL-TEAP-HNGPNLVNALPL 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtBPNP_001262522.1 CtBP_dh 28..342 CDD:240624 92/274 (34%)
LdhA 45..351 CDD:223980 92/283 (33%)
phgdhNP_955871.2 PGDH 8..499 CDD:273556 117/386 (30%)
PGDH_4 8..310 CDD:240650 89/266 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0111
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D305212at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3406
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.850

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