DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CtBP and Ctbp2

DIOPT Version :9

Sequence 1:NP_001262522.1 Gene:CtBP / 41602 FlyBaseID:FBgn0020496 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_001164215.1 Gene:Ctbp2 / 13017 MGIID:1201686 Length:988 Species:Mus musculus


Alignment Length:462 Identity:278/462 - (60%)
Similarity:332/462 - (71%) Gaps:49/462 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LMMPKRSRIDVKGNFANGPLQARPLVALLDGRDCSIEMPILKDVATVAFCDAQSTSEIHEKVLNE 69
            ::.|:.|   ::....||||..||||||||||||::|||||||:|||||||||||.|||||||||
Mouse   557 MLTPEPS---IRPQIMNGPLHPRPLVALLDGRDCTVEMPILKDLATVAFCDAQSTQEIHEKVLNE 618

  Fly    70 AVGALMWHTIILTKEDLEKFKALRIIVRIGSGTDNIDVKAAGELGIAVCNVPGYGVEEVADTTMC 134
            ||||:|:|||.||:||||||||||:|||||||.||:|:||||||||||||:|...|||.||:|:|
Mouse   619 AVGAMMYHTITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELGIAVCNIPSAAVEETADSTVC 683

  Fly   135 LILNLYRRTYWLANMVREGKKFTGPEQVREAAHGCARIRGDTLGLVGLGRIGSAVALRAKAFGFN 199
            .|||||||..||...:|||.:....||:||.|.|.|||||:||||:|.||.|.|||:|||||||:
Mouse   684 HILNLYRRNTWLYQALREGTRVQSVEQIREVASGAARIRGETLGLIGFGRTGQAVAVRAKAFGFS 748

  Fly   200 VIFYDPYLPDGIDKSLGLTRVYTLQDLLFQSDCVSLHCTLNEHNHHLINEFTIKQMRPGAFLVNT 264
            ||||||||.|||::|||:.|||||||||:|||||||||.||||||||||:|||||||.||||||.
Mouse   749 VIFYDPYLQDGIERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHLINDFTIKQMRQGAFLVNA 813

  Fly   265 ARGGLVDDETLALALKQGRIRAAALDVHENEPYN---GALKDAPNLICTPHAAFFSDASATELRE 326
            |||||||::.||.|||:||||.|||||||:||::   |.||||||||||||.|::|:.::.|:||
Mouse   814 ARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFAQGPLKDAPNLICTPHTAWYSEQASLEMRE 878

  Fly   327 MAATEIRRAIVGNIPDVLRNCVNKEYFMRTPPAAAAGGVAAAVYPEGLNGGYYTGALHHRAHSTT 391
            .|||||||||.|.||:.||||||||:|:.:.|.:...  ..|::|| |||..|.           
Mouse   879 AAATEIRRAITGRIPESLRNCVNKEFFVTSAPWSVID--QQAIHPE-LNGATYR----------- 929

  Fly   392 PHDGPHSTTNLGSTVGGGPTTVAQAAAAAVAAAAAAALLPSPVP-SHLSPQVGGLPLGIVSSQSP 455
                 :....:|...||.|             .|...::|..:| :|..|.|.          .|
Mouse   930 -----YPPGIVGVAPGGLP-------------PAMEGIIPGGIPVTHNLPTVA----------HP 966

  Fly   456 LSAPDPN 462
            ..||.||
Mouse   967 SQAPSPN 973

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtBPNP_001262522.1 CtBP_dh 28..342 CDD:240624 238/316 (75%)
LdhA 45..351 CDD:223980 230/308 (75%)
Ctbp2NP_001164215.1 CtBP_dh 577..895 CDD:240624 239/317 (75%)
SerA 593..903 CDD:223189 231/309 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 490 1.000 Domainoid score I372
eggNOG 1 0.900 - - E1_COG0111
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H75187
Inparanoid 1 1.050 534 1.000 Inparanoid score I1187
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60148
OrthoDB 1 1.010 - - D305212at33208
OrthoFinder 1 1.000 - - FOG0001579
OrthoInspector 1 1.000 - - otm42891
orthoMCL 1 0.900 - - OOG6_102736
Panther 1 1.100 - - LDO PTHR46029
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3406
SonicParanoid 1 1.000 - - X1820
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.870

Return to query results.
Submit another query.