DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CtBP and Ctbp1

DIOPT Version :9

Sequence 1:NP_001262522.1 Gene:CtBP / 41602 FlyBaseID:FBgn0020496 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_038530.1 Gene:Ctbp1 / 13016 MGIID:1201685 Length:441 Species:Mus musculus


Alignment Length:481 Identity:284/481 - (59%)
Similarity:336/481 - (69%) Gaps:47/481 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDKNLMMPKRSRIDVKGNFANGPLQARPLVALLDGRDCSIEMPILKDVATVAFCDAQSTSEIHEK 65
            |..:.::.|...:.|:....|||:..||||||||||||::|||||||||||||||||||.|||||
Mouse     1 MGSSHLLNKGLPLGVRPPIMNGPMHPRPLVALLDGRDCTVEMPILKDVATVAFCDAQSTQEIHEK 65

  Fly    66 VLNEAVGALMWHTIILTKEDLEKFKALRIIVRIGSGTDNIDVKAAGELGIAVCNVPGYGVEEVAD 130
            ||||||||||:|||.||:||||||||||||||||||.||||:|:||:|||||||||...|||.||
Mouse    66 VLNEAVGALMYHTITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETAD 130

  Fly   131 TTMCLILNLYRRTYWLANMVREGKKFTGPEQVREAAHGCARIRGDTLGLVGLGRIGSAVALRAKA 195
            :|:|.||||||||.||...:|||.:....||:||.|.|.|||||:|||::||||:|.||||||||
Mouse   131 STLCHILNLYRRTTWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKA 195

  Fly   196 FGFNVIFYDPYLPDGIDKSLGLTRVYTLQDLLFQSDCVSLHCTLNEHNHHLINEFTIKQMRPGAF 260
            |||||:||||||.|||:::|||.||.|||||||.||||:|||.||||||||||:||:||||.|||
Mouse   196 FGFNVLFYDPYLSDGIERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAF 260

  Fly   261 LVNTARGGLVDDETLALALKQGRIRAAALDVHENEPYN---GALKDAPNLICTPHAAFFSDASAT 322
            |||||||||||::.||.|||:||||.|||||||:||::   |.||||||||||||||::|:.::.
Mouse   261 LVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYSEQASI 325

  Fly   323 ELREMAATEIRRAIVGNIPDVLRNCVNKEYFMRTPPAAAAGGVAAAVYPEGLNGGYYTGALHHRA 387
            |:||.||.||||||.|.|||.|:|||||::.  |.....|....|.|:|| |||..|:..     
Mouse   326 EMREEAAREIRRAITGRIPDSLKNCVNKDHL--TAATHWASMDPAVVHPE-LNGAAYSRY----- 382

  Fly   388 HSTTPHDGPHSTTNLGSTVGGGPTTVAQAAAAAVAAAAAAALLPSPVPSHLSPQVGGLPLGIVSS 452
                                  |..|...|...:.||....     |||.:|     |..|:...
Mouse   383 ----------------------PPGVVSVAPTGIPAAVEGI-----VPSAMS-----LSHGLPPV 415

  Fly   453 QSPLSAPDPNNHLSSSIKTEVKAEST 478
            ..|..||.|    ..::|.|...:.|
Mouse   416 AHPPHAPSP----GQTVKPEADRDHT 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtBPNP_001262522.1 CtBP_dh 28..342 CDD:240624 241/316 (76%)
LdhA 45..351 CDD:223980 233/308 (76%)
Ctbp1NP_038530.1 Interaction with GLIS2 1 1..70 45/68 (66%)
CtBP_dh 28..346 CDD:240624 242/317 (76%)
Interaction with GLIS2 2 288..360 46/73 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 409..441 8/33 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 490 1.000 Domainoid score I372
eggNOG 1 0.900 - - E1_COG0111
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 534 1.000 Inparanoid score I1187
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60148
OrthoDB 1 1.010 - - D305212at33208
OrthoFinder 1 1.000 - - FOG0001579
OrthoInspector 1 1.000 - - otm42891
orthoMCL 1 0.900 - - OOG6_102736
Panther 1 1.100 - - O PTHR46029
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3406
SonicParanoid 1 1.000 - - X1820
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.870

Return to query results.
Submit another query.