DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8031 and memo1

DIOPT Version :10

Sequence 1:NP_650252.1 Gene:CG8031 / 41601 FlyBaseID:FBgn0038110 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_956088.1 Gene:memo1 / 327360 ZFINID:ZDB-GENE-030131-5571 Length:297 Species:Danio rerio


Alignment Length:292 Identity:191/292 - (65%)
Similarity:233/292 - (79%) Gaps:1/292 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSARRATHAGSWYTDSGAELSRQLDRWLGAADLSHGPARAIIAPHAGYTYCGACAAFAYRQVSPV 65
            |..|.|:|||||||.||::|:.||:.||..|....|||||||||||||||||||||.||:||.|.
Zfish     5 MVCREASHAGSWYTASGSQLNAQLEGWLSQAQSIAGPARAIIAPHAGYTYCGACAAHAYKQVDPS 69

  Fly    66 VVKRIFILGPSHHVRLRGCALSVAKKYRTPLYDLKIDAQINSELEKTGKFSWMDMKTDEDEHSIE 130
            :.:|:|||||||||.|..||||.|:.||||||||:||.::.::|.|||.|..|.::|||||||||
Zfish    70 ITRRVFILGPSHHVPLSRCALSPAEVYRTPLYDLRIDQKVYADLWKTGMFERMSLQTDEDEHSIE 134

  Fly   131 MHLPYIAKVMEDYKDQFTIVPILVGSLNPEQEAQYGSLLSSYLMDPTNLFVISSDFCHWGHRFSY 195
            |||||.||.||::||:|:|||:|||:|:..:|.:||.|||.||.||:|||:||.||||||.||.|
Zfish   135 MHLPYTAKAMENHKDEFSIVPVLVGALSGSKEQEYGKLLSKYLADPSNLFIISPDFCHWGQRFRY 199

  Fly   196 TYYDSSCGAIHKSIEKLDKQGMDIIESLNPHSFTEYLRKYNNTICGRHPIGVMLGAVKALQDQGY 260
            ||||.|.|.|::|||.|||.||.|||.|:|.||:.||:||:|||||||||||:|.||..|:..|.
Zfish   200 TYYDESQGEIYRSIEHLDKMGMGIIEQLDPISFSNYLKKYHNTICGRHPIGVLLNAVAELKKNGI 264

  Fly   261 DKMSFKFLKYAQSSQCQDIEDSSVSYASGSLV 292
            | |:|.||.|||||||::..|||||||:|:|:
Zfish   265 D-MNFSFLNYAQSSQCRNWSDSSVSYAAGALI 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8031NP_650252.1 MEMO_like 5..289 CDD:153373 187/283 (66%)
memo1NP_956088.1 MEMO_like 9..294 CDD:153373 188/285 (66%)

Return to query results.
Submit another query.