DRSC/TRiP Functional Genomics Resources

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Protein Alignment MC4R and Rh6

DIOPT Version :10

Sequence 1:NP_005903.2 Gene:MC4R / 4160 HGNCID:6932 Length:332 Species:Homo sapiens
Sequence 2:NP_524368.5 Gene:Rh6 / 41889 FlyBaseID:FBgn0019940 Length:363 Species:Drosophila melanogaster


Alignment Length:324 Identity:63/324 - (19%)
Similarity:112/324 - (34%) Gaps:78/324 - (24%)


- Green bases have known domain annotations that are detailed below.


Human    50 VFVTLGVISLLENILVIVAIAKNKNLHSPMYFFICSLAVADMLVS-------VSNGSETIVITLL 107
            |...||.:||..|.:|:.....:|.|.:|...|:.:||.:|.::.       |.||.....|   
  Fly    53 VIAILGTMSLAGNFIVMYIFTSSKGLRTPSNMFVVNLAFSDFMMMFTMFPPVVLNGFYGTWI--- 114

Human   108 NSTDTDAQSFTVNIDNVIDSVI-CSSLLASICSLLSIAVDRYFTIFYALQYHNIMTVKRVGIIIS 171
                  ...|...:..:..|:. |    .||.|:..||.|||..|...:. ...:|.....:.:.
  Fly   115 ------MGPFLCELYGMFGSLFGC----VSIWSMTLIAYDRYCVIVKGMA-RKPLTATAAVLRLM 168

Human   172 CIWAAC--------------------TVSGILFII--YSDSSAVIICLITMFFTMLALMASLYVH 214
            .:|..|                    |..|..:..  :.:.|.:|:..:.::.|.|..:...|.|
  Fly   169 VVWTICGAWALMPLFGWNRYVPEGNMTACGTDYFAKDWWNRSYIIVYSLWVYLTPLLTIIFSYWH 233

Human   215 MFLMARLHIK---------RIAVLPGTGAIRQGA-NMKGAITLTILIGVFVVCWAPF-------- 261
            :......|.|         .:|.|..:.|.:..| .:|.|......|.::...|.|:        
  Fly   234 IMKAVAAHEKAMREQAKKMNVASLRNSEADKSKAIEIKLAKVALTTISLWFFAWTPYTIINYAGI 298

Human   262 --FLHLIFYISCPQNPYCVCFMSHFNLYLILIMCNSIIDPLIYALRSQELRKTFKEIICCYPLG 323
              .:||     .|.:..|..         :....|::.:|::|.|...:.::..:|.:.|...|
  Fly   299 FESMHL-----SPLSTICGS---------VFAKANAVCNPIVYGLSHPKYKQVLREKMPCLACG 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MC4RNP_005903.2 7tmA_MC4R 45..313 CDD:320475 60/312 (19%)
TM helix 1 46..72 CDD:320475 7/21 (33%)
TM helix 2 79..105 CDD:320475 7/32 (22%)
TM helix 3 122..152 CDD:320475 10/30 (33%)
TM helix 4 164..184 CDD:320475 4/39 (10%)
TM helix 5 189..218 CDD:320475 6/28 (21%)
TM helix 6 238..268 CDD:320475 8/40 (20%)
TM helix 7 281..306 CDD:320475 4/24 (17%)
Rh6NP_524368.5 7tmA_photoreceptors_insect 48..338 CDD:320207 60/312 (19%)
TM helix 1 49..75 CDD:320207 7/21 (33%)
TM helix 2 82..108 CDD:320207 5/25 (20%)
TM helix 3 120..150 CDD:320207 10/33 (30%)
TM helix 4 161..181 CDD:320207 2/19 (11%)
TM helix 5 208..237 CDD:320207 6/28 (21%)
TM helix 6 267..297 CDD:320207 6/29 (21%)
TM helix 7 306..331 CDD:320207 6/33 (18%)

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