DRSC/TRiP Functional Genomics Resources

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Protein Alignment yellow-f2 and YBR053C

DIOPT Version :9

Sequence 1:NP_650247.1 Gene:yellow-f2 / 41596 FlyBaseID:FBgn0038105 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_009609.1 Gene:YBR053C / 852342 SGDID:S000000257 Length:358 Species:Saccharomyces cerevisiae


Alignment Length:361 Identity:66/361 - (18%)
Similarity:123/361 - (34%) Gaps:118/361 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 PYNNVPMGATHFRGRLFVTMPRRRVGIPSTLNYIDLAEDGSNRSPKLRAYPNFALNQFNASAENL 162
            ||.:|| ||.|..|..||    :..|   ||.::|:.:...::...:. .|..:.:.|:.|..| 
Yeast    17 PYYHVP-GAIHSEGITFV----KETG---TLLWVDIFKGEVHKVEDIE-QPESSHSFFSISRAN- 71

  Fly   163 VSVYRTSVDACQRLWFIDTGMLEYPNNRQQIRRPSIW----VVDLATDQVLKRFDVPESIAETGR 223
                           :.....:|||.|..:::. |:.    ::|.|:...:|     :.:..:..
Yeast    72 ---------------YGKNASIEYPPNPDELKE-SVGCIFPILDGASQNEIK-----QVLFGSKF 115

  Fly   224 GLASITVDVKAGQCGDAYAYIPDLVYRRLYVYHLRNDRIWSFEHNYFNFDPLSGDLSIGGQT-FR 287
            |:..:.......:....|:..|:          |..||.:....|..|..|....:.:|..: |.
Yeast   116 GIGKLDFSKSEWEYVILYSECPE----------LSTDRAYKLRSNDGNVSPDGKYIYVGLMSDFP 170

  Fly   288 WD----DGIFSITLGAQKLDGSRDAYFHPMASTNEFVVSNRVLQQESNAARSDHGNDFRVLGSRG 348
            :|    ..:..:.|.|.|::          ...|..::.|.:...||:                 
Yeast   171 FDLEPIGCLLRVDLLAHKIE----------LVWNCLLIPNAIHWDESD----------------- 208

  Fly   349 PSTQSTMHAYD---------PGTGVIFFDEIQRNGVGCWKTSKPISAENYGSVDSNAEDMIYPSD 404
               |.||:..|         ||..::..||:             |..:|     ||.:....|  
Yeast   209 ---QKTMYVTDSLNFTIWKCPGGDLLKRDEL-------------IDVKN-----SNNQSFESP-- 250

  Fly   405 LSIDEDGT-IWVM-----SNSMPIFIYSTLDTSIYN 434
               :.||: ||..     |..:.|.::||....:::
Yeast   251 ---EPDGSAIWFSKDGKHSGFLFITVWSTSKVQMFD 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yellow-f2NP_650247.1 MRJP 163..451 CDD:281074 48/296 (16%)
YBR053CNP_009609.1 YvrE 1..345 CDD:225921 66/361 (18%)
WD40 repeat 150..186 CDD:293791 7/35 (20%)
WD40 repeat 199..248 CDD:293791 15/86 (17%)
WD40 repeat 259..294 CDD:293791 4/25 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3386
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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