DRSC/TRiP Functional Genomics Resources

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Protein Alignment yellow-f2 and yellow-h

DIOPT Version :9

Sequence 1:NP_650247.1 Gene:yellow-f2 / 41596 FlyBaseID:FBgn0038105 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_651912.3 Gene:yellow-h / 43779 FlyBaseID:FBgn0039896 Length:463 Species:Drosophila melanogaster


Alignment Length:432 Identity:137/432 - (31%)
Similarity:218/432 - (50%) Gaps:56/432 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 VFRWKQMDF-YNRGDGHLSSGGRKDRPSFSAPVVFPGKYSRRKRKIMTSRDTPVVVSSRADSDDP 92
            |:.||.:|| |:                         .:.:|::.|:                  
  Fly    56 VYEWKYLDFLYS-------------------------TFVQRQQSIL------------------ 77

  Fly    93 NASYIPYNNVPMGATHFRGRLFVTMPRRRVGIPSTLNYIDLAEDGSNRSPKLRAYPNFAL--NQF 155
            |..::|.||:|:|......|||||.||.:.|:|::|..:......|  ||.::.|||:..  |..
  Fly    78 NGDFVPKNNLPLGIDVHNNRLFVTTPRWKNGVPASLGTLPFPPKES--SPAIKPYPNWEAHGNPN 140

  Fly   156 NASAENLVSVYRTSVDACQRLWFIDTGMLEYPNNRQQIRRPSIWVVDLATDQVLKRFDVPESIAE 220
            |.....|:|||||:||.|.|:|.||:|::....|..||..|.|.|.||.:|:::.|:::..|..:
  Fly   141 NPDCSKLMSVYRTAVDRCDRIWLIDSGIVNATINLNQICPPKIVVYDLKSDELIVRYNLEASHVK 205

  Fly   221 TGRGLASITVDVKAGQCGDAYAYIPDLVYRRLYVYHLRNDRIWSFEHNYFNFDPLSGDLSIGGQT 285
            .....::|.||: ...|.||:|.:.|:....|.||.|..:|.|...:..|..||.:.|.::.|..
  Fly   206 QDSLHSNIVVDI-GEDCDDAHAIVSDVWRFGLLVYSLSKNRSWRVTNYNFYPDPFASDFNVYGLN 269

  Fly   286 FRWDDGIFSITLGAQKLDGSRDAYFHPMASTNEFVVSNRVLQQES--NAARSDHGNDFRVLGSRG 348
            |:|.||:|.:::...|....|..|||||||..||:|...:|..||  .....::...|..:|.||
  Fly   270 FQWLDGVFGMSIYYNKKIMERVLYFHPMASFKEFMVPMNILLNESVWQTNTQEYAKYFIPIGDRG 334

  Fly   349 PSTQSTMHAYDPGTGVIFFDEIQRNGVGCWKTSKPISAENYGSVDS--NAEDMIYPSDLSID--E 409
            .::||:.... ...|::||.::.::.:|||.||||.:..:.|...:  |:..:.:|:||.:|  :
  Fly   335 YNSQSSTSGV-TRNGIMFFTQVHQDDIGCWDTSKPYTRAHLGKFHNMENSNLIQFPNDLKVDKEK 398

  Fly   410 DGTIWVMSNSMPIFIYSTLDTSIYNFRIWKQKASLAKRGTVC 451
            |..:|::||.:|||:||.||....||||.|...:...|.:||
  Fly   399 DQNVWLISNRLPIFLYSNLDYGEVNFRILKANVNKIIRNSVC 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yellow-f2NP_650247.1 MRJP 163..451 CDD:281074 102/293 (35%)
yellow-hNP_651912.3 MRJP 148..440 CDD:281074 102/293 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449209
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3386
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D940689at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10009
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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