DRSC/TRiP Functional Genomics Resources

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Protein Alignment yellow-f2 and yellow-k

DIOPT Version :9

Sequence 1:NP_650247.1 Gene:yellow-f2 / 41596 FlyBaseID:FBgn0038105 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_648772.1 Gene:yellow-k / 39678 FlyBaseID:FBgn0036504 Length:342 Species:Drosophila melanogaster


Alignment Length:289 Identity:61/289 - (21%)
Similarity:103/289 - (35%) Gaps:101/289 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 TSVDACQRLWFIDTGMLEYPNNRQQIRRPSIWVVDLATDQV-LKRFDVPESIAETGRGLASITVD 231
            :.|||..|||.:|.|   :|.:...   |.::|.||..:.. |.|.|....|........::.:.
  Fly   101 SQVDALSRLWVMDIG---FPGSTCS---PRLFVFDLMRNNAELLRIDCGHHIGANDTHFLTVQMG 159

  Fly   232 VKAGQC-GDAYAY-----IPDLVYRRLYVYHLRNDRIW---SFEHN-YFNFDP------------ 274
            .|:..| .:.:.|     :|:::     .|.:. ::.|   |.|.| |.|.:.            
  Fly   160 PKSPGCEHERHIYFILGKVPEIL-----AYDIL-EQTWHRLSLESNKYENMNQSFPIKPVDFIFG 218

  Fly   275 LSGDLSIGGQTFRWDDGIFSITLGAQKLDGSRDAYFHPMASTNEFVVSNRVLQQESNAARSDHGN 339
            :.|:|.:..|     ||....|:...:::|..:....|:                :|:.:..|  
  Fly   219 IQGELILSDQ-----DGDLYSTVDRLEIEGKSELASKPI----------------NNSIKLTH-- 260

  Fly   340 DFRVLGSRGPSTQS-------TMHAYDPGTGVIFFDEIQRNGVGCWK--------------TSKP 383
                |||...|::|       |::...|..|.:         |.|.|              |||.
  Fly   261 ----LGSLLGSSRSMIIDNFGTLYYVIPKFGAV---------VRCAKLANITAEGNEIIYITSKN 312

  Fly   384 ISAENYGSVDS---------NAEDMIYPS 403
            |....:.|.|:         ||:||.:||
  Fly   313 IQQIFFTSNDALWVLSDRVLNAKDMCFPS 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yellow-f2NP_650247.1 MRJP 163..451 CDD:281074 61/289 (21%)
yellow-kNP_648772.1 MRJP 102..>201 CDD:281074 26/110 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449279
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10009
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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