DRSC/TRiP Functional Genomics Resources

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Protein Alignment yellow-f2 and yellow-c

DIOPT Version :10

Sequence 1:NP_650247.1 Gene:yellow-f2 / 41596 FlyBaseID:FBgn0038105 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_523570.3 Gene:yellow-c / 34879 FlyBaseID:FBgn0041713 Length:438 Species:Drosophila melanogaster


Alignment Length:475 Identity:170/475 - (35%)
Similarity:253/475 - (53%) Gaps:77/475 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LILSLISGLQLLSLADADPMIEVFRWKQMDFYNRGDGHLSSGGRKDRPSFSAPVVFPGKYSRRKR 71
            |::.||.....::.|..:   |.|.|||:.|              |.|                 
  Fly    11 LMVCLIGAFSRIASAKLE---EKFSWKQLAF--------------DWP----------------- 41

  Fly    72 KIMTSRDTPVVVSSRADSDDPNASYIPYNNVPMGATHFRGRLFVTMPRRRVGIPSTLNYIDLAED 136
                   ||   .:.|::.. |..||..||:|:|...::.|:|||:||.:.|:.:||||||:  :
  Fly    42 -------TP---EAEAEAKS-NGHYIVENNLPLGVERWQNRIFVTVPRWKAGVAATLNYIDI--N 93

  Fly   137 GSNRSPKLRAYPNFALNQFNASAE----------------------------NLVSVYRTSVDAC 173
            .:.:||||..||::..|:.....:                            .::|.:|..||.|
  Fly    94 STEKSPKLHPYPSWEANKLPIDVQPQDQKTPSGGRLDADKAQDAGIQLKDNSTVISTFRIQVDVC 158

  Fly   174 QRLWFIDTGMLEYPNNRQQIRRPSIWVVDLATDQVLKRFDVPESIAETGRGLASITVDVKAGQCG 238
            .|||.:|||:.:...:.:||...||.|.||.||.:|:||.:|....:.....|:|.||....:|.
  Fly   159 DRLWVLDTGLADILGSPKQITPNSILVFDLKTDTLLRRFTIPADQTKEDSFFANIVVDADRSECQ 223

  Fly   239 DAYAYIPDLVYRRLYVYHLRNDRIWSFEHNYFNFDPLSGDLSIGGQTFRWDDGIFSITLGAQKLD 303
            ||:||||||....:.||.||||:.:..:||:|:||||.||.::||..|:|.||:|.:.:|....|
  Fly   224 DAFAYIPDLGAYGVIVYSLRNDKSYRVKHNFFHFDPLHGDFNVGGVNFQWTDGVFGLAVGPMNPD 288

  Fly   304 GSRDAYFHPMASTNEFVVSNRVLQQESNAARSDHGNDFRVLGSRGPSTQSTMHAYDPGTGVIFFD 368
            .|:|.|||.:|||.||.|||||||.||:....|...||:.:|.||.:.|||...:||.|||||:.
  Fly   289 HSKDIYFHALASTKEFKVSNRVLQNESHVTAGDSYYDFKYVGDRGMNGQSTAEVFDPETGVIFYT 353

  Fly   369 EIQRNGVGCWKTSKPISAENYGSVDSNAEDMIYPSDLSIDEDGTIWVMSNSMPIFIYSTLDTSIY 433
            ::.::.:.||...:|.:.:..|.:||::..:::|:|:.||.:|||||:|:.||.::|..||.|..
  Fly   354 QVNKDAIACWNIKRPYTPDTQGLIDSDSHTLVFPNDMKIDNEGTIWVLSDKMPTYLYKELDPSAV 418

  Fly   434 NFRI-WKQKASLAKRGTVCE 452
            |:|| ..|...|.| ||.||
  Fly   419 NYRILMGQNRDLIK-GTPCE 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yellow-f2NP_650247.1 MRJP 163..451 CDD:308585 126/288 (44%)
yellow-cNP_523570.3 MRJP 148..436 CDD:308585 126/288 (44%)

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