DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment yellow-f2 and y

DIOPT Version :9

Sequence 1:NP_650247.1 Gene:yellow-f2 / 41596 FlyBaseID:FBgn0038105 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_476792.1 Gene:y / 30980 FlyBaseID:FBgn0004034 Length:541 Species:Drosophila melanogaster


Alignment Length:427 Identity:149/427 - (34%)
Similarity:220/427 - (51%) Gaps:49/427 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 EVFRWKQMDFYNRGDGHLSSGGRKDRPSFSAPVVFPGKYSRRKRKIMTSRDTPVVVSSRADSDDP 92
            |.:.|.|:||                       .||.  :|.|.:.:.|.|              
  Fly    27 ERYSWSQLDF-----------------------AFPN--TRLKDQALASGD-------------- 52

  Fly    93 NASYIPYNNVPMGATHFRGRLFVTMPRRRVGIPSTLNYIDLAEDGSNRSPKLRAYPNFALNQFNA 157
               |||.|.:|:|..||..|||||:||.|.|||:||.||:: :.....||:|..||::..|....
  Fly    53 ---YIPQNALPVGVEHFGNRLFVTVPRWRDGIPATLTYINM-DRSLTGSPELIPYPDWRSNTAGD 113

  Fly   158 SAENLVSVYRTSVDACQRLWFIDTGMLEYPNNRQQIRRPSIWVVDLATDQVLKRFDVPESIAETG 222
            .|.::.:.||..||.|.|||.:|||.:...|........::.|.||.||..::|:::|.......
  Fly   114 CANSITTAYRIKVDECGRLWVLDTGTVGIGNTTTNPCPYAVNVFDLTTDTRIRRYELPGVDTNPN 178

  Fly   223 RGLASITVDVKAGQCGDAYAYIPDLVYRRLYVYHLRNDRIWSFE-HNYFNFDPLSGDLSIGGQTF 286
            ..:|:|.||: ...|.|||||..|.:...|..|....::.|.|. |:||..|||.||.::.|..|
  Fly   179 TFIANIAVDI-GKNCDDAYAYFADELGYGLIAYSWELNKSWRFSAHSYFFPDPLRGDFNVAGINF 242

  Fly   287 RW-DDGIFSITLGAQKLDGSRDAYFHPMASTNEFVVSNRVLQQESNAARSDHGNDFRVLGSRGPS 350
            :| ::|||.::|...:.||.|..||.|:||..:|.||.|:|:.|:....|.|  ||..|..|||:
  Fly   243 QWGEEGIFGMSLSPIRSDGYRTLYFSPLASHRQFAVSTRILRDETRTEDSYH--DFVALDERGPN 305

  Fly   351 TQSTMHAYDPGTGVIFFDEIQRNGVGCWKTSKPISAENYGSVDSNAEDMIYPSDLSIDEDGTIWV 415
            :.:|..... ..|:..|:.|.:|.||||.:|.|.|.:.:|.||.:...:::|:|:.|||:..:||
  Fly   306 SHTTSRVMS-DDGIELFNLIDQNAVGCWHSSMPYSPQFHGIVDRDDVGLVFPADVKIDENKNVWV 369

  Fly   416 MSNSMPIFIYSTLDTSIYNFRIWKQKASLAKRGTVCE 452
            :|:.||:|:.|.||.|..||||:....:.....|||:
  Fly   370 LSDRMPVFLLSDLDYSDTNFRIYTAPLATLIENTVCD 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yellow-f2NP_650247.1 MRJP 163..451 CDD:281074 106/289 (37%)
yNP_476792.1 MRJP 119..405 CDD:308585 106/289 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449208
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3386
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D940689at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10009
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

Return to query results.
Submit another query.