DRSC/TRiP Functional Genomics Resources

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Protein Alignment yellow-f and yellow-e

DIOPT Version :9

Sequence 1:NP_524335.1 Gene:yellow-f / 41595 FlyBaseID:FBgn0041710 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_524344.1 Gene:yellow-e / 41653 FlyBaseID:FBgn0041711 Length:530 Species:Drosophila melanogaster


Alignment Length:429 Identity:113/429 - (26%)
Similarity:189/429 - (44%) Gaps:55/429 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLSLDVLLLCAISGFQLLISADGDPMIEVFK-WKQLDFYNRGDGYKDLWNRICIPDSHFYNSRKC 64
            |:.:.|.::||:  ....:|....|.::|.| ||.|.:        :...:..:.|.:|||.:  
  Fly     1 MIRILVGVICAV--LWSPVSQALTPGLQVAKQWKLLRY--------NFEPQAPVSDPNFYNPQ-- 53

  Fly    65 LGSSSSGSFIQYNNVPQGVTHFRGRLFVTVPRRQPGIPSTLNYIDLAKDGWSQSPHLRAYP---- 125
                        |.:..|:.....|:||..|:...|:|||::::..|:.|  .||.|.|:|    
  Fly    54 ------------NVLITGLAVTDDRIFVATPKLFSGVPSTVSWVSKAQFG--DSPTLNAFPDWTF 104

  Fly   126 -NLAVNQYNASEQNLVSVYRTSVDVCGRLWFVDTGMLEFPNNRQQIRHPSIWVIDLANDRLLKRF 189
             |...:.:|.|:..|.||||..||.|.|:|.:|.|:.....:.:....|.|.|:|||.||:::|.
  Fly   105 SNTGRSDFNCSDLILTSVYRLRVDSCNRIWLLDAGISRSLEDYEITCPPKILVVDLATDRVVRRI 169

  Fly   190 EIPQSIVEIGRGL-ASITID-VGARRCNDAYAYIPDLVNRRLHVYHLRSDRIWSFEHSFFNFDPL 252
            :.|..::. |..| .::.|| ..|:.|:|.:.||.|.|...:.||....|..|...|.....||.
  Fly   170 DFPPEVLR-GESLFTNMVIDETTAKGCDDVFVYITDTVEPGIIVYDSGKDVTWRVSHPAMYPDPD 233

  Fly   253 SDNLNIGGQTFRWDDGIFSATLGSYKPDGSRDVFFHPMASTNEFVVSNRVLQQEFNAARSDHGD- 316
            .....|....|...||:...|.    .:.:..|:|.|:|:...|.|...||:    |.....|. 
  Fly   234 FAQSEIHEHRFVLMDGVVGLTF----DERTGVVYFQPLATDRVFSVHKNVLR----AGPLPDGKM 290

  Fly   317 -DFHLLGTRGPSTQSTMHKYDPRTGVIFFAEVQKSGVGCWKTSKPFSTENHGSVYS-NSSEMIYP 379
             |..|:|.:  |:|.......|....:.|:.:.::.:..|.     .|.|..||.: :..::.:.
  Fly   291 LDVKLVGKK--SSQGIGLAVSPFDSSLIFSPLSETAIASWN-----PTTNQQSVLAFDRDQLQFV 348

  Fly   380 SDLTI--DEEGYIWVMSNSMPIFVYSKLDVEKYNFRIWR 416
            :|:|.  .|.|.|:.:::....|....|:..::|.||.|
  Fly   349 ADITTTKSEPGVIYAIASKFHRFFLKNLNPNEFNNRIVR 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yellow-fNP_524335.1 MRJP 140..428 CDD:281074 77/284 (27%)
yellow-eNP_524344.1 MRJP 120..393 CDD:281074 77/284 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449242
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3386
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D940689at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10009
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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