DRSC/TRiP Functional Genomics Resources

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Protein Alignment yellow-f and yellow-e2

DIOPT Version :9

Sequence 1:NP_524335.1 Gene:yellow-f / 41595 FlyBaseID:FBgn0041710 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_650289.2 Gene:yellow-e2 / 41652 FlyBaseID:FBgn0038151 Length:435 Species:Drosophila melanogaster


Alignment Length:432 Identity:111/432 - (25%)
Similarity:192/432 - (44%) Gaps:77/432 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 VFKWKQLDFYNRGDGYKD--LWNRICIPDSH-------FYNSRKCLGSSSSGSFIQYNNVPQGVT 84
            ||:||.|.:....:..:|  |.|....|||.       :|..               |..|.   
  Fly    44 VFEWKNLQYGFPSEQERDQVLRNGRYNPDSPIPIDIDVYYPP---------------NGGPP--- 90

  Fly    85 HFRGRLFVTVPRRQPGIPSTLNYI-DLAKDGWSQSPHLRAYPNLAVNQYNASE----QNLVSVYR 144
                |.|||.||...|:|.:|.|: ::.::..|:   ::|||:.   |:::|.    ..|.||||
  Fly    91 ----RHFVTSPRFGQGVPFSLGYVTNVQRENGSE---IQAYPSY---QWHSSHGANCDGLTSVYR 145

  Fly   145 TSVDVCGRLWFVDTGMLEFPNNRQQIRH--PSIWVIDLANDRLLKRFEIPQSI--VEIGRGLASI 205
            ..:|.||::|.:|:|.:||      ::|  |.:.|.|||.|:|:.|:.:|::.  .::.| ..:|
  Fly   146 VHIDACGQMWVLDSGEIEF------VQHCAPQVMVFDLATDQLIHRYRLPETSYKAKVSR-FVNI 203

  Fly   206 TIDV----GARRCNDAYAYIPDLVNRRLHVYHLRSDRIWSFEHSFFNFDPLSDNLNIGGQTFRWD 266
            ..|:    .:.:|.|.:||:.|..::.:.||.:.....|..|:.|...|.......:.|::|...
  Fly   204 FADIRDPPPSGQCKDVFAYLADPTSKAIVVYDVVGQSSWRIENKFTYPDAKFGTHTVAGESFELL 268

  Fly   267 DG-IFSATLGSYKPDG---SRDVFFHPMASTNEFVVSNRVLQQEFNAAR--SDHGDDFHLLGTRG 325
            || :..||    .|.|   .|.:.||.:::..|..:...:|....|..:  |....:|.:||.||
  Fly   269 DGPLALAT----TPLGLGLRRHLIFHALSNELELAIPLDILNNATNWQKGLSSSLSEFTVLGKRG 329

  Fly   326 PSTQSTMHKYDPRTGVIFFAEVQKSGVGCWKTSKPFSTENHGSVYSNSSEMIYPSDLTI-----D 385
              .|...|... |.|.:|...::..|:..|...:|::.||...:..|.:.:.:.|.:.|     |
  Fly   330 --IQCASHAIS-RQGFLFCGFLEPIGIFGWDIRRPYNRENVKLLAINPATLQFVSGMKIVRRPAD 391

  Fly   386 EEGYIWVMSNSMPIFVYSKLDVEKYNFRIWR--QSTLLAKRG 425
            ....:|::|:.:.......:|..:.|:|:.|  ...||..||
  Fly   392 GREELWLLSDRLQKIFAGTIDYREINYRVMRCDVDDLLQGRG 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yellow-fNP_524335.1 MRJP 140..428 CDD:281074 80/307 (26%)
yellow-e2NP_650289.2 MRJP 141..434 CDD:281074 80/307 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449228
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3386
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D940689at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10009
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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