DRSC/TRiP Functional Genomics Resources

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Protein Alignment yellow-f and yellow-e3

DIOPT Version :9

Sequence 1:NP_524335.1 Gene:yellow-f / 41595 FlyBaseID:FBgn0041710 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_650288.1 Gene:yellow-e3 / 41651 FlyBaseID:FBgn0038150 Length:409 Species:Drosophila melanogaster


Alignment Length:450 Identity:118/450 - (26%)
Similarity:194/450 - (43%) Gaps:75/450 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLSLDVLLLCAISGFQLLISADGDPMIEVFKWKQLDFYNRGDGYKDL--WNRICIPDSHFYNSRK 63
            ||.:.:.|.||:.|..|::.    .:..:.:|..|..   ||   ||  .||....|..      
  Fly     1 MLVVLLALFCAVQGQALVLK----ELHTLHQWTNLSL---GD---DLSKGNRFLPVDVD------ 49

  Fly    64 CLGSSSSGSFIQYNNVPQGVTHFRGRLFVTVPRRQPGIPSTLNYIDLAKDGWSQSPHLRAYPNLA 128
                      |:|.:  :|    |.|.|:|:||.....|.||..:....:...::|.|..|||  
  Fly    50 ----------IEYGD--EG----RHRTFLTIPRLGMATPFTLATVIAEHNELVENPRLEPYPN-- 96

  Fly   129 VNQYNASEQN---LVSVYRTSVDVCGRLWFVDTGMLEFPNNRQQIRHPSIWVIDLANDRLLKRFE 190
             .:::....|   :.|..||.:|.|.|||.||:|.:    |..|:..|.|...||..|.|::|..
  Fly    97 -EEWHVPPNNCSGITSAIRTYIDECWRLWVVDSGQV----NSLQLCPPQILTFDLVKDELVQRHA 156

  Fly   191 I-PQSIVEIGRGLASITIDVGAR----RCNDAYAYIPDLVNRRLHVYHLRSDRIWSFEHSFFNFD 250
            : |.|.:.......::.:|:..|    ||....|||.|.....|.|:...:.|.|..||......
  Fly   157 LPPDSYIPSVSIFTALVVDLAERGTPNRCVGGRAYIADAWGYGLIVFDSLTGRSWRIEHESMKPS 221

  Fly   251 PLSDNLNIGGQTFRWDDGIFSATLGSYKPDGSRDVFFHPMASTNEF-----VVSNRVLQQEFNAA 310
            ||   |.: |::.....|||:.:|...:.: .|.::||.:.|.||.     :::|....:..||:
  Fly   222 PL---LRL-GRSSNSQAGIFTVSLSPSEVE-DRFLYFHTLNSFNEMRVPLSLINNETFWKSANAS 281

  Fly   311 RSDHGDDFHLLGTRGPSTQSTMHKYDPRTGVIFFAEVQKSGVGCWKTS-KPFSTENHGSVYSNSS 374
            |    |.||.|||||...:|.:.   .::|.::.:.:....:..|:.| ..::.::...|..|..
  Fly   282 R----DSFHSLGTRGIQCESEVM---DQSGNLYCSLISLGALVKWEESVSNYTADDLRVVAYNPH 339

  Fly   375 EMIYPSDLTIDE----EGYIWVMSNSMPIFVYSKLDVEKYNFRI--WRQSTLLAKRGTVC 428
            ::.:.:.|.|:.    |..:|.:|:...:||...|...:..|:|  .|.:.|||  .|.|
  Fly   340 KIKFVTGLKINRNSKGEEELWALSSQPKLFVGGDLPANEVKFQIIGCRTADLLA--NTPC 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yellow-fNP_524335.1 MRJP 140..428 CDD:281074 83/304 (27%)
yellow-e3NP_650288.1 MRJP 110..397 CDD:281074 83/304 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449229
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3386
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D940689at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10009
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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