DRSC/TRiP Functional Genomics Resources

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Protein Alignment yellow-f and yellow-f2

DIOPT Version :9

Sequence 1:NP_524335.1 Gene:yellow-f / 41595 FlyBaseID:FBgn0041710 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_650247.1 Gene:yellow-f2 / 41596 FlyBaseID:FBgn0038105 Length:452 Species:Drosophila melanogaster


Alignment Length:452 Identity:314/452 - (69%)
Similarity:362/452 - (80%) Gaps:23/452 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLSLDVLLLCAISGFQLLISADGDPMIEVFKWKQLDFYNRGDGYKDLWNR---------ICIPDS 56
            |||...|:|..|||.|||..||.|||||||:|||:||||||||:.....|         :..|..
  Fly     1 MLSPQFLILSLISGLQLLSLADADPMIEVFRWKQMDFYNRGDGHLSSGGRKDRPSFSAPVVFPGK 65

  Fly    57 HFYNSRKCLGS--------------SSSGSFIQYNNVPQGVTHFRGRLFVTVPRRQPGIPSTLNY 107
            :....||.:.|              ..:.|:|.|||||.|.||||||||||:|||:.||||||||
  Fly    66 YSRRKRKIMTSRDTPVVVSSRADSDDPNASYIPYNNVPMGATHFRGRLFVTMPRRRVGIPSTLNY 130

  Fly   108 IDLAKDGWSQSPHLRAYPNLAVNQYNASEQNLVSVYRTSVDVCGRLWFVDTGMLEFPNNRQQIRH 172
            ||||:||.::||.||||||.|:||:|||.:|||||||||||.|.||||:||||||:||||||||.
  Fly   131 IDLAEDGSNRSPKLRAYPNFALNQFNASAENLVSVYRTSVDACQRLWFIDTGMLEYPNNRQQIRR 195

  Fly   173 PSIWVIDLANDRLLKRFEIPQSIVEIGRGLASITIDVGARRCNDAYAYIPDLVNRRLHVYHLRSD 237
            |||||:|||.|::||||::|:||.|.||||||||:||.|.:|.||||||||||.|||:|||||:|
  Fly   196 PSIWVVDLATDQVLKRFDVPESIAETGRGLASITVDVKAGQCGDAYAYIPDLVYRRLYVYHLRND 260

  Fly   238 RIWSFEHSFFNFDPLSDNLNIGGQTFRWDDGIFSATLGSYKPDGSRDVFFHPMASTNEFVVSNRV 302
            |||||||::|||||||.:|:||||||||||||||.|||:.|.|||||.:||||||||||||||||
  Fly   261 RIWSFEHNYFNFDPLSGDLSIGGQTFRWDDGIFSITLGAQKLDGSRDAYFHPMASTNEFVVSNRV 325

  Fly   303 LQQEFNAARSDHGDDFHLLGTRGPSTQSTMHKYDPRTGVIFFAEVQKSGVGCWKTSKPFSTENHG 367
            ||||.||||||||:||.:||:||||||||||.|||.||||||.|:|::||||||||||.|.||:|
  Fly   326 LQQESNAARSDHGNDFRVLGSRGPSTQSTMHAYDPGTGVIFFDEIQRNGVGCWKTSKPISAENYG 390

  Fly   368 SVYSNSSEMIYPSDLTIDEEGYIWVMSNSMPIFVYSKLDVEKYNFRIWRQSTLLAKRGTVCE 429
            ||.||:.:|||||||:|||:|.|||||||||||:||.||...||||||:|...|||||||||
  Fly   391 SVDSNAEDMIYPSDLSIDEDGTIWVMSNSMPIFIYSTLDTSIYNFRIWKQKASLAKRGTVCE 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yellow-fNP_524335.1 MRJP 140..428 CDD:281074 224/287 (78%)
yellow-f2NP_650247.1 MRJP 163..451 CDD:281074 224/287 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449196
Domainoid 1 1.000 331 1.000 Domainoid score I3095
eggNOG 1 0.900 - - E1_COG3386
Homologene 1 1.000 - - H44733
Inparanoid 1 1.050 409 1.000 Inparanoid score I3870
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG27452
OrthoDB 1 1.010 - - D26557at7147
OrthoFinder 1 1.000 - - FOG0016744
OrthoInspector 1 1.000 - - mtm9667
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10009
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X10536
1211.910

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