DRSC/TRiP Functional Genomics Resources

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Protein Alignment yellow-f and yellow-d

DIOPT Version :9

Sequence 1:NP_524335.1 Gene:yellow-f / 41595 FlyBaseID:FBgn0041710 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_523820.2 Gene:yellow-d / 37703 FlyBaseID:FBgn0041712 Length:432 Species:Drosophila melanogaster


Alignment Length:447 Identity:113/447 - (25%)
Similarity:198/447 - (44%) Gaps:71/447 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLSLDVLLLCAISGFQLL------ISADGDPMIE----VFKWKQLDFYNRGDGYKDLWNRICIPD 55
            |:.|.:||:    .|.|.      :..:|...:.    :.:|.||:|     |:....:|     
  Fly     3 MMPLRILLI----AFSLTLAQSYGVGVNGPRPVRTVETLTQWGQLEF-----GFPTAQDR----- 53

  Fly    56 SHFYNSRKCLGSSSSGSFIQYNNV-----PQGVTHFRGRLFVTVPRRQPGIPSTLNYIDLAKDGW 115
                     ..:.::|:.:..|..     ||.:.:.:.|||.|:||...|||.||..:. |..| 
  Fly    54 ---------ENAQAAGNLVPENGTPIDVQPQYMANGQIRLFTTIPRFVTGIPYTLATVS-ATQG- 107

  Fly   116 SQSPHLRAYPNLAVNQYNASE-QNLVSVYRTSVDVCGRLWFVDTGMLEFPNNRQQIRHPSIWVID 179
            ...|.|:.|||.:.:..|..: ..:.|.:|.::..|.::|.:|:|::    ...|:..|.:....
  Fly   108 RNGPLLQPYPNYSWHNANGEDCDRITSAFRVAITECNQMWVIDSGVI----GTTQLCPPQLLQFA 168

  Fly   180 LANDRLLKRFEIPQSIVEIGRGLASITIDVGAR------RCNDAYAYIPDLVNRRLHVYHLRSDR 238
            ||.||||.||..|.. ..|..|...||.:|..:      .|:....|:.|:....|.||..::..
  Fly   169 LATDRLLHRFRFPND-TYIPSGSLFITPNVLVQDPPPRGTCSRTMIYVADVSYHGLVVYDHQAQT 232

  Fly   239 IWSFEHSFFNFDPLSDNLNIGGQTFRWDDGIFSATLGSYKPDGSRDVFFHPMASTNEFVVSNRVL 303
            .|..|:.|...||......|.|::|...||:|:..      :..|:::|||:||.:|:.|....|
  Fly   233 SWRAENRFMYPDPDYGKHTIAGESFYLMDGMFALN------NDKRNLYFHPLASASEYSVPLSAL 291

  Fly   304 QQEFNAARSDHG--DDFHLLGTRGPSTQSTMHKYDPRTGV--IFFAEVQKSGVGCWKTSKPFSTE 364
            .::.|.|.....  ::|.|||.|  .::......|.|..|  :.|..|:   :..|..:.|:::.
  Fly   292 NRQQNWANGPEALPEEFRLLGRR--RSECAASAIDGRNNVYCVTFNPVK---LFVWNVNSPYNSR 351

  Fly   365 NHGSVYSNSSEMIYPSDLTI--DEEGY--IWVMSNSMPIFVYSKLDVEKYNFRIWRQ 417
            |.|::.:.|.::.:.|.:.:  :.||.  :|::||.........|:.::.||||.|:
  Fly   352 NFGNLPAKSDDLQFVSGMKVLRNREGQEELWMLSNRYQKIAAGTLNSKEVNFRILRR 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yellow-fNP_524335.1 MRJP 140..428 CDD:281074 77/292 (26%)
yellow-dNP_523820.2 MRJP 133..413 CDD:281074 77/292 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449226
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3386
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D940689at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10009
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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