DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment yellow-f and LOC1276629

DIOPT Version :10

Sequence 1:NP_524335.1 Gene:yellow-f / 41595 FlyBaseID:FBgn0041710 Length:429 Species:Drosophila melanogaster
Sequence 2:XP_315998.4 Gene:LOC1276629 / 1276629 VectorBaseID:AGAMI1_000015 Length:380 Species:Anopheles gambiae


Alignment Length:426 Identity:92/426 - (21%)
Similarity:167/426 - (39%) Gaps:107/426 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CAISGFQL-----LISADGDPMIEVFKWKQLDFYN---RGDGYKDLWNRICIP---------DSH 57
            |.::|..|     |:||       :.....|::.|   |.:|     |.|..|         .:|
Mosquito     3 CRVTGLPLALLFVLVSA-------LASTDDLEYCNIVYRING-----NSIDFPCLSTKNIYISAH 55

  Fly    58 FYNSR-----KCLGSSSSGSFIQYNNVPQGVTHFRGRLFVTVPRRQPGIPSTLNYIDLAKDGWSQ 117
            .|..|     :|          ||:|         .|:.:.:||.:.|:|:||..|||.|.  :.
Mosquito    56 RYQPRNVMPVRC----------QYDN---------QRMLMALPRLRSGVPTTLGQIDLNKP--NC 99

  Fly   118 SPHLRAYPNLAVNQYN--ASEQNLVSVYRTSVDVCGRLWFVDTGMLEFPNNRQQIRH--PSIWVI 178
            ..|::.||..|..:..  .|.|:::.:|   |||....|.:|:|:..|  ..|.|:.  |.::..
Mosquito   100 YAHIKPYPCWAYQEEGNCNSLQSVIDLY---VDVKRIAWVLDSGITNF--LEQPIKRCPPKVYAF 159

  Fly   179 DLANDRLLKRFEIPQSIVEIGRGLASITIDVGARRCNDAYAYIPD-----LVNRRLHVYHLRSDR 238
            :|:||:.:|..::.: ||:....|..:..|.  ......:.||.|     :|   |.|.:.:|.|
Mosquito   160 NLSNDKTVKTIDLSE-IVKSSSRLQYLVTDY--NELGHPFVYISDGDGAIIV---LDVNNNKSFR 218

  Fly   239 IWSFEHSFFNFDPLSDNLNIGGQTFRWDDGIFSATLGSYKPDGSRDVFFHPMASTNEFVVSNRVL 303
            :         ..|.:.:...|      |..:....| ..||.|...|.|       .::...:|.
Mosquito   219 V---------VLPRAISAGCG------DSDVLYLLL-IPKPKGQSLVIF-------SYLCGQKVY 260

  Fly   304 QQEFNAARSDHGDDFHL-LGTRGPSTQSTMHKYDPRTGVI--FFAEVQKSGVGCWKTSKPFSTEN 365
            ..:....||..|....: |||:  ...|.:...|...||:  :..|.:   :..|.:.:|: .|.
Mosquito   261 SIKSEHLRSGKGSSAIVELGTK--RKHSVLLGTDGGKGVVLRYRGEAE---LYLWDSDQPY-REC 319

  Fly   366 HGSVYSNSSEMIYPSDLTIDEEGYIWVMSNSMPIFV 401
            :..:..|:.|....:.:.:.:..::..:|:::..|:
Mosquito   320 NFELIQNADECRLSTHVVVGKNEHLLSLSSNLSDFL 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yellow-fNP_524335.1 MRJP 140..428 CDD:308585 55/272 (20%)
LOC1276629XP_315998.4 MRJP 121..337 CDD:308585 54/255 (21%)

Return to query results.
Submit another query.