DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment yellow-f and LOC1273771

DIOPT Version :10

Sequence 1:NP_524335.1 Gene:yellow-f / 41595 FlyBaseID:FBgn0041710 Length:429 Species:Drosophila melanogaster
Sequence 2:XP_312784.3 Gene:LOC1273771 / 1273771 VectorBaseID:AGAMI1_014072 Length:462 Species:Anopheles gambiae


Alignment Length:432 Identity:175/432 - (40%)
Similarity:251/432 - (58%) Gaps:43/432 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LCAISGFQLLISADGDPMIEVFKWKQLDF------YNRGDGYKDLWNRICIPDSHFYNSRKCLGS 67
            |..::|...|.|...|   ||.||:::::      ..|.:||                       
Mosquito     9 LLLLAGLVALASGQVD---EVLKWQRVEYDVPAEVLQRENGY----------------------- 47

  Fly    68 SSSGSFIQYNNVPQGVTHFRGRLFVTVPRRQPGIPSTLNYIDLAKDGWSQSPHLRAYPNLAVNQY 132
                  |...|:|.|..|.:.|:||.|.||:.|||||||.:||:....:.:..|:.|||.|:|:.
Mosquito    48 ------IPIGNIPMGAVHHKNRVFVAVARRRWGIPSTLNVVDLSPPFPNTNVILKPYPNFALNEL 106

  Fly   133 NASEQ----NLVSVYRTSVDVCGRLWFVDTGMLEFPNNRQQIRHPSIWVIDLANDRLLKRFEIPQ 193
            .|..|    .:|:|||..||.|.|||||||||:|.|.|...::.||:|.|||..:..:.|||||:
Mosquito   107 RADLQPDANRIVTVYRPRVDRCDRLWFVDTGMMEIPGNFTVVQRPSVWSIDLNTNEPIHRFEIPK 171

  Fly   194 SIVEIGRGLASITIDVGARRCNDAYAYIPDLVNRRLHVYHLRSDRIWSFEHSFFNFDPLSDNLNI 258
            ..||.|.||.|||:||....|...:.||.||...|:.||...:.|.|.|.|::|..:||..:..|
Mosquito   172 EAVETGYGLTSITLDVDPSDCEKVFVYISDLQTYRMVVYDYANRRAWRFLHNYFFLNPLEGDYLI 236

  Fly   259 GGQTFRWDDGIFSATLGSYKP-DGSRDVFFHPMASTNEFVVSNRVLQQEFNAARSDHGDDFHLLG 322
            .|..|.|||||||..||:..| ...|..:||.::|.:||.||.|||:.|..:.||.||.||.|||
Mosquito   237 QGINFAWDDGIFSIALGNPDPVTKFRTAYFHALSSNSEFTVSTRVLRNETASQRSWHGTDFQLLG 301

  Fly   323 TRGPSTQSTMHKYDPRTGVIFFAEVQKSGVGCWKTSKPFSTENHGSVYSNSSEMIYPSDLTIDEE 387
            .||..:||::|.:||.|||||||.:|::.:.||.::|||:.:|...||.|..:::||:||:||:.
Mosquito   302 YRGSKSQSSIHAFDPETGVIFFALIQQNAILCWDSNKPFAPQNMAIVYKNDRDIVYPNDLSIDQN 366

  Fly   388 GYIWVMSNSMPIFVYSKLDVEKYNFRIWRQSTLLAKRGTVCE 429
            ||:|.|:||:...:|::|:::::||.:||.:.....:||||:
Mosquito   367 GYVWFMTNSIIKLLYTQLNLDEFNFFVWRANIKQIIKGTVCD 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yellow-fNP_524335.1 MRJP 140..428 CDD:308585 133/288 (46%)
LOC1273771XP_312784.3 None

Return to query results.
Submit another query.