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Protein Alignment CG31342 and Sdcbp

DIOPT Version :9

Sequence 1:	NP_001097763.1	Gene:	CG31342 / 41592	FlyBaseID:	FBgn0051342	Length:	994	Species:	Drosophila melanogaster
Sequence 2:	NP_114192.1	Gene:	Sdcbp / 83841	RGDID:	621497	Length:	300	Species:	Rattus norvegicus

Alignment Length:	256	Identity:	67/256 - (26%)
Similarity:	114/256 - (44%)	Gaps:	49/256 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly   746 EFTPSRNGAFRMQPPPQG---TPPSSTN--PAQQSPNKRLTLREQQVMQLRREIM----HPGGVR 801
            |..|..:||     |.||   ..|||.|  .|..:.|. ..:|..::.|..||::    ..|.:.
  Rat    70 ENMPVVSGA-----PTQGQLVARPSSVNYMVAPVTGND-AGIRRAEIKQGIREVILCKDQDGKIG 128

  Fly   802 LNLRRKDCVGSIAWVEAFGGVWIAGWKQKEHPVLYNALHIGDQLLSIAGVSIS--SAAEANKIIR 864
            |.|:..|           .|:::. ..|...|.....|..|||:|.|.|.:.:  |:.:|:|:::
  Rat   129 LRLKSVD-----------NGIFVQ-LVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLK 181

  Fly   865 NTNTLFVEVLLRRIPFGRAYAIRRDREGQCLGLIRDGNTSTIVDVVPNSLAARHGLPPKTQSCDG 929
            ......:.:.:|..||.|...:.:|..|....:.:.|.   |..:|.:|.|||:||
  Rat   182 QAFGEKITMTIRDRPFERTVTMHKDSSGHVGFIFKSGK---ITSIVKDSSAARNGL--------- 234

  Fly   930 NSLTFWMLTEINGRSLNLFFKDFEIRDRLNSVGRDISILVQPSDLITKLKKQ-----LKSL 985
              ||...:.||||::: :..||.:|.|.|::.|..::|.:.|:.:...:.|:     :|||
  Rat   235 --LTDHHICEINGQNV-IGLKDAQIADILSTAGTVVTITIMPAFIFEHIIKRMAPSIMKSL 292

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.