DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31342 and sdcbp

DIOPT Version :9

Sequence 1:NP_001097763.1 Gene:CG31342 / 41592 FlyBaseID:FBgn0051342 Length:994 Species:Drosophila melanogaster
Sequence 2:NP_999963.2 Gene:sdcbp / 407719 ZFINID:ZDB-GENE-081104-57 Length:307 Species:Danio rerio


Alignment Length:352 Identity:83/352 - (23%)
Similarity:143/352 - (40%) Gaps:76/352 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   650 ISSRPSRRDF---HYLKLLNTPLKTKTSHKSTSAANNNIEQSTPSS---SNSTQVTPTQR----- 703
            :|..||..|.   .:::..|||  |.:..|:......:.:|:.||:   |.:.|...:.|     
Zfish     1 MSLYPSLEDMKVDKFIQAHNTP--TASPSKALPLPEPSSDQNEPSTYYDSKAEQTGTSSRLYPEL 63

  Fly   704 NNTSIVTGDSQEQRRRSSSTSDAQAPLQRVPQPATQRNANNNEFTPSRNGAFRMQPPPQGTPPSS 768
            |....:...|...:..|||.:|..|                ...:...:|......|..|:.   
Zfish    64 NEFMGLNLSSDALQTFSSSIADQTA----------------GALSVCTSGMSWAAAPITGSD--- 109

  Fly   769 TNPAQQSPNKRLTLREQQVMQLRREIM----HPGGVRLNLRRKDCVGSIAWVEAFGGVWIAGWKQ 829
                       |.::..::.|..||::    ..|.:.|.|:..|....:..|:|.....:||   
Zfish   110 -----------LGVKRAEIRQGVREVVLCKDMDGKIGLRLKAIDNGVFVQLVQANTAAALAG--- 160

  Fly   830 KEHPVLYNALHIGDQLLSIAGVSIS--SAAEANKIIRNTNTLFVEVLLRRIPFGRAYAIRRDREG 892
                     |..|||:|.|.|.|.:  ::..|:|:::|:|...:.:.:|..|..|...:.:|..|
Zfish   161 ---------LRFGDQILEINGKSCAGWNSDYAHKVLKNSNPERITLAVRDRPLERTVTLHKDMNG 216

  Fly   893 QCLGLIRDGNTSTIVDVVPNSLAARHGLPPKTQSCDGNSLTFWMLTEINGRSLNLFFKDFEIRDR 957
            |...:.|.|.   |..:|.:|.:||:||           ||...:.||||::: :..||.:|.|.
Zfish   217 QLGFIFRKGR---ITSIVKDSSSARNGL-----------LTDHQICEINGQNI-IGLKDTQIMDI 266

  Fly   958 LNSVGRDISILVQPSDLITKLKKQLKS 984
            |||.|..::|.|.|..:...:.|::.|
Zfish   267 LNSSGGVVTITVMPVVIFEHMMKRMSS 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31342NP_001097763.1 PDZ 886..973 CDD:214570 29/86 (34%)
sdcbpNP_999963.2 PDZ_signaling 121..200 CDD:238492 22/90 (24%)
PDZ_signaling 205..278 CDD:238492 28/87 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12345
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4935
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
44.000

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